Cow genome map

Conread name: Pig2-33D08

Conread position: 2-374
Cow position: chr6:27534306-27534693 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 3-356
Cow position: chr6:3893154-3893509 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 251

Conread position: 3-358
Cow position: chr6:43187590-43187239 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 67

Conread position: 3-371
Cow position: chr6:65874807-65875168 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 3-373
Cow position: chr6:50120446-50120815 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 4-371
Cow position: chr6:35724863-35724497 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 6

Conread position: 7-307
Cow position: chr6:54358048-54358339 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 7-357
Cow position: chr6:62961373-62961030 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 165, 37

Conread position: 7-367
Cow position: chr6:14290037-14290385 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 62

Conread position: 7-369
Cow position: chr6:29689336-29688980 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 200

Conread position: 7-371
Cow position: chr6:33984273-33983929 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 168, 19

Conread position: 7-373
Cow position: chr6:21588461-21588095 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 238

Conread position: 7-374
Cow position: chr6:63406266-63405920 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 176, 19

Conread position: 8-304
Cow position: chr6:6601434-6601713 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 16, 35

Conread position: 8-310
Cow position: chr6:9322479-9322179 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 8-310
Cow position: chr6:51674242-51673948 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 176

Conread position: 8-328
Cow position: chr6:57383892-57383572 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 15, 85

Conread position: 8-331
Cow position: chr6:17344675-17344353 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 54

Conread position: 8-335
Cow position: chr6:44510566-44510239 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 144

Conread position: 8-338
Cow position: chr6:51877231-51876911 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 91

Conread position: 8-349
Cow position: chr6:10695197-10694857 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 141

Conread position: 8-360
Cow position: chr6:53811054-53810714 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 8-365
Cow position: chr6:14897658-14897299 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 8-367
Cow position: chr6:32018628-32018995 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 8-367
Cow position: chr6:38439087-38438723 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 240

Conread position: 8-367
Cow position: chr6:41677405-41677051 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 146

Conread position: 8-367
Cow position: chr6:47381160-47380783 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 8-369
Cow position: chr6:34030733-34030396 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 125

Conread position: 8-369
Cow position: chr6:47574264-47573913 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 59

Conread position: 8-369
Cow position: chr6:59507682-59507353 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 105, 20

Conread position: 8-371
Cow position: chr6:727164-727514 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 28

Conread position: 8-371
Cow position: chr6:9737788-9738141 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 8-371
Cow position: chr6:21832184-21832547 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 240

Conread position: 8-371
Cow position: chr6:29484450-29484094 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 8-371
Cow position: chr6:33466433-33466071 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 186

Conread position: 8-371
Cow position: chr6:34075345-34074981 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 23

Conread position: 8-371
Cow position: chr6:42267193-42266852 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 166, 18

Conread position: 8-371
Cow position: chr6:55593546-55593183 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 141

Conread position: 8-372
Cow position: chr6:3928610-3928254 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 9, 121

Conread position: 8-372
Cow position: chr6:11193105-11193474 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 183

Conread position: 8-372
Cow position: chr6:11638730-11639087 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 155

Conread position: 8-372
Cow position: chr6:35416500-35416861 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 8-373
Cow position: chr6:2618089-2618455 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 83

Conread position: 8-373
Cow position: chr6:17149699-17150063 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 8-374
Cow position: chr6:1274378-1274735 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 81

Conread position: 8-374
Cow position: chr6:10236664-10236306 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 8-374
Cow position: chr6:14851277-14851636 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 14

Conread position: 8-374
Cow position: chr6:24623666-24624028 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 207

Conread position: 8-374
Cow position: chr6:57857246-57856879 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 152

Conread position: 8-375
Cow position: chr6:33896172-33896531 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 21

Conread position: 8-375
Cow position: chr6:46283629-46283990 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 8-379
Cow position: chr6:4903525-4903891 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 188

Conread position: 9-367
Cow position: chr6:32287029-32286671 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 232

Conread position: 9-371
Cow position: chr6:44017354-44017715 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 60

Conread position: 9-374
Cow position: chr6:62326748-62326384 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 20, 125

Conread position: 10-359
Cow position: chr6:55386927-55386591 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 305, 18

Conread position: 10-367
Cow position: chr6:31270852-31270500 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 229
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 82

Conread position: 10-371
Cow position: chr6:43797423-43797788 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 239

Conread position: 11-315
Cow position: chr6:45901520-45901821 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 41

Conread position: 11-348
Cow position: chr6:40251327-40251661 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 7, 72

Conread position: 11-360
Cow position: chr6:1402091-1402433 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 84

Conread position: 11-360
Cow position: chr6:1406679-1407021 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 84

Conread position: 11-374
Cow position: chr6:6034328-6034687 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 36

Conread position: 11-374
Cow position: chr6:16645356-16645006 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 301, 168

Conread position: 11-374
Cow position: chr6:19712772-19713124 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 210

Conread position: 11-374
Cow position: chr6:19719041-19718695 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 11-374
Cow position: chr6:28184848-28185209 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 11-374
Cow position: chr6:44146476-44146837 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 118

Conread position: 11-374
Cow position: chr6:46763933-46764292 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 35

Conread position: 11-374
Cow position: chr6:53543010-53543373 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 236

Conread position: 11-374
Cow position: chr6:65819109-65819470 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 236

Conread position: 12-371
Cow position: chr6:6182254-6182595 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 76

Conread position: 12-371
Cow position: chr6:20552771-20553128 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 171

Conread position: 12-371
Cow position: chr6:34494144-34493788 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 20

Conread position: 12-371
Cow position: chr6:34504052-34504408 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 20

Conread position: 14-359
Cow position: chr6:60876765-60876421 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 232

Conread position: 14-367
Cow position: chr6:58594937-58595289 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 179

Conread position: 14-369
Cow position: chr6:35601147-35600794 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 197

Conread position: 14-372
Cow position: chr6:3272013-3272369 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 232

Conread position: 14-372
Cow position: chr6:33949693-33950048 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 22

Conread position: 15-336
Cow position: chr6:27887379-27887062 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 132

Conread position: 15-374
Cow position: chr6:6595886-6595533 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 38

Conread position: 15-374
Cow position: chr6:14928919-14928569 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 15-374
Cow position: chr6:22043541-22043898 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 202

Conread position: 16-306
Cow position: chr6:11389147-11389434 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 151, 143

Conread position: 16-308
Cow position: chr6:32664634-32664924 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 231

Conread position: 16-310
Cow position: chr6:20581309-20581600 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 156, 230

Conread position: 16-311
Cow position: chr6:48882210-48881922 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 156, 72

Conread position: 16-315
Cow position: chr6:7448962-7448666 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 158, 227

Conread position: 16-315
Cow position: chr6:18912268-18912563 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 159, 84

Conread position: 16-315
Cow position: chr6:55361328-55361624 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 156, 230

Conread position: 16-323
Cow position: chr6:20267849-20268147 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 158, 128

Conread position: 16-331
Cow position: chr6:46225498-46225809 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 158, 95

Conread position: 16-346
Cow position: chr6:2089736-2089414 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 132, 35

Conread position: 16-350
Cow position: chr6:508054-508388 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 231

Conread position: 16-350
Cow position: chr6:45975966-45975633 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-359
Cow position: chr6:11721741-11722083 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-359
Cow position: chr6:55239157-55238815 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 227

Conread position: 16-361
Cow position: chr6:13591776-13591436 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 26

Conread position: 16-367
Cow position: chr6:10681451-10681113 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 80

Conread position: 16-367
Cow position: chr6:26667558-26667907 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 16-369
Cow position: chr6:43779158-43778821 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 51

Conread position: 16-370
Cow position: chr6:28065457-28065105 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 197

Conread position: 16-370
Cow position: chr6:39136965-39136617 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 114

Conread position: 16-370
Cow position: chr6:45666467-45666813 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 26

Conread position: 16-371
Cow position: chr6:479013-478663 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 23

Conread position: 16-371
Cow position: chr6:706465-706111 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-371
Cow position: chr6:1537172-1536818 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr6:1834462-1834108 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr6:2186315-2186669 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 230

Conread position: 16-371
Cow position: chr6:3886038-3886391 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-371
Cow position: chr6:5946308-5946662 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 30

Conread position: 16-371
Cow position: chr6:8205654-8205301 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-371
Cow position: chr6:11289000-11289353 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 117

Conread position: 16-371
Cow position: chr6:15275773-15276127 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr6:17049840-17049486 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 115

Conread position: 16-371
Cow position: chr6:17121856-17121499 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 16-371
Cow position: chr6:20451426-20451073 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 136

Conread position: 16-371
Cow position: chr6:24242754-24242402 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr6:25374641-25374995 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-371
Cow position: chr6:25790250-25790586 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 158, 122

Conread position: 16-371
Cow position: chr6:27475883-27475524 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 55, 237

Conread position: 16-371
Cow position: chr6:28481791-28481445 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 12

Conread position: 16-371
Cow position: chr6:35873265-35873616 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 127

Conread position: 16-371
Cow position: chr6:36531741-36531386 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr6:39331066-39331418 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 117

Conread position: 16-371
Cow position: chr6:40813828-40813478 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 164

Conread position: 16-371
Cow position: chr6:40863565-40863916 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 141, 146

Conread position: 16-371
Cow position: chr6:47039744-47040096 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 105

Conread position: 16-371
Cow position: chr6:50571658-50571304 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr6:51718024-51717668 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 200

Conread position: 16-371
Cow position: chr6:51733548-51733195 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 16-371
Cow position: chr6:55903555-55903202 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 18

Conread position: 16-371
Cow position: chr6:60332812-60332456 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 232

Conread position: 16-372
Cow position: chr6:3484952-3485307 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 230

Conread position: 16-372
Cow position: chr6:7105067-7105416 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 111

Conread position: 16-372
Cow position: chr6:12927035-12926685 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 22

Conread position: 16-372
Cow position: chr6:33301135-33300777 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 233

Conread position: 16-372
Cow position: chr6:47149504-47149858 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 15

Conread position: 16-374
Cow position: chr6:126668-127022 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 187

Conread position: 16-374
Cow position: chr6:327896-328253 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 84

Conread position: 16-374
Cow position: chr6:451796-452153 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 226

Conread position: 16-374
Cow position: chr6:843360-843718 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 231

Conread position: 16-374
Cow position: chr6:889024-888667 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:1797092-1796737 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:2875567-2875921 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:3152682-3152328 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 187

Conread position: 16-374
Cow position: chr6:6568767-6569117 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 57

Conread position: 16-374
Cow position: chr6:7137875-7138230 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 225

Conread position: 16-374
Cow position: chr6:7467184-7467540 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 30

Conread position: 16-374
Cow position: chr6:9234978-9234622 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 232

Conread position: 16-374
Cow position: chr6:10044673-10044325 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 69

Conread position: 16-374
Cow position: chr6:11020125-11019767 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:11401787-11401430 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:11453400-11453758 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 219

Conread position: 16-374
Cow position: chr6:11869469-11869824 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 101

Conread position: 16-374
Cow position: chr6:12662855-12663205 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 69

Conread position: 16-374
Cow position: chr6:12997886-12997531 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 186

Conread position: 16-374
Cow position: chr6:13307931-13308287 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:16049826-16050182 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 80

Conread position: 16-374
Cow position: chr6:17111699-17112055 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 16-374
Cow position: chr6:17386990-17386633 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:18803592-18803948 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:19103441-19103798 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:21163770-21163413 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:21712173-21711816 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:22737239-22737596 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:23879592-23879946 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 63

Conread position: 16-374
Cow position: chr6:26324733-26325089 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 232

Conread position: 16-374
Cow position: chr6:26771655-26772011 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 16-374
Cow position: chr6:27094120-27094476 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 225

Conread position: 16-374
Cow position: chr6:27173308-27172939 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 16-374
Cow position: chr6:28000929-28001281 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:28160876-28160519 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 16-374
Cow position: chr6:31912708-31913065 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:31941334-31940977 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:33808967-33809324 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:37388033-37387688 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 158, 228

Conread position: 16-374
Cow position: chr6:39912789-39912434 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:43087136-43087486 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 165

Conread position: 16-374
Cow position: chr6:45479621-45479978 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:46948282-46947929 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 63

Conread position: 16-374
Cow position: chr6:51150409-51150052 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:53537543-53537185 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 206

Conread position: 16-374
Cow position: chr6:55538804-55539161 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr6:56926200-56925842 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 230

Conread position: 16-374
Cow position: chr6:57521642-57521285 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:58031243-58030889 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 16-374
Cow position: chr6:60379630-60379273 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:62665242-62664885 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:63177510-63177153 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr6:67553699-67553342 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 206

Conread position: 16-375
Cow position: chr6:23568126-23568484 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 219

Conread position: 16-375
Cow position: chr6:40278518-40278168 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 66

Conread position: 17-370
Cow position: chr6:8753989-8754340 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 230

Conread position: 17-374
Cow position: chr6:56451629-56451985 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 229

Conread position: 18-371
Cow position: chr6:15137708-15138060 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 228

Conread position: 18-371
Cow position: chr6:64719780-64719431 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 9

Conread position: 18-373
Cow position: chr6:52249048-52249397 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 18-374
Cow position: chr6:40550235-40550590 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 204

Conread position: 18-374
Cow position: chr6:53672798-53672446 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 226

Conread position: 18-374
Cow position: chr6:64426248-64425902 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 18-377
Cow position: chr6:6471472-6471826 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 26

Conread position: 22-359
Cow position: chr6:1263617-1263287 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 158

Conread position: 22-374
Cow position: chr6:6557422-6557071 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 224

Conread position: 22-374
Cow position: chr6:6721432-6721080 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 91, 24

Conread position: 23-312
Cow position: chr6:5096348-5096632 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 184

Conread position: 23-328
Cow position: chr6:7216255-7215951 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 223

Conread position: 23-360
Cow position: chr6:59596704-59596367 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 19

Conread position: 23-371
Cow position: chr6:917518-917156 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 116, 238

Conread position: 23-371
Cow position: chr6:9733533-9733857 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 279, 12

Conread position: 23-371
Cow position: chr6:16410512-16410171 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 12

Conread position: 23-371
Cow position: chr6:28172364-28172024 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 63

Conread position: 23-371
Cow position: chr6:41231947-41231601 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 138

Conread position: 23-371
Cow position: chr6:50114133-50113797 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 23-374
Cow position: chr6:55474767-55474416 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 215

Conread position: 24-371
Cow position: chr6:16766381-16766727 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 216

Conread position: 24-372
Cow position: chr6:59619531-59619188 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 18

Conread position: 26-372
Cow position: chr6:3574241-3573905 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 20

Conread position: 27-357
Cow position: chr6:60167107-60167431 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 69, 57

Conread position: 27-371
Cow position: chr6:10650338-10650679 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 217

Conread position: 28-315
Cow position: chr6:28136205-28135923 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 28-365
Cow position: chr6:32420404-32420068 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 104

Conread position: 28-366
Cow position: chr6:24631797-24632132 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 21

Conread position: 28-367
Cow position: chr6:16625235-16624893 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 251

Conread position: 28-371
Cow position: chr6:14950201-14950539 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 51

Conread position: 28-374
Cow position: chr6:224054-224394 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 15

Conread position: 29-367
Cow position: chr6:6459572-6459231 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 39

Conread position: 30-374
Cow position: chr6:15481012-15480684 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 12

Conread position: 31-371
Cow position: chr6:6119544-6119874 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 11

Conread position: 31-371
Cow position: chr6:16703293-16703630 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 106

Conread position: 31-371
Cow position: chr6:19243491-19243149 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 7, 185

Conread position: 31-371
Cow position: chr6:35704066-35704408 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 11

Conread position: 31-376
Cow position: chr6:618864-618523 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 143, 213

Conread position: 32-367
Cow position: chr6:29084934-29085258 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 142, 10

Conread position: 32-372
Cow position: chr6:27526515-27526851 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 78

Conread position: 32-374
Cow position: chr6:67448476-67448816 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 15

Conread position: 35-370
Cow position: chr6:16220707-16221014 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 35-373
Cow position: chr6:18987574-18987251 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 139, 28

Conread position: 35-374
Cow position: chr6:15181605-15181265 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 215

Conread position: 36-352
Cow position: chr6:66839830-66839520 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 62

Conread position: 37-367
Cow position: chr6:8633878-8634187 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 137, 104

Conread position: 37-371
Cow position: chr6:10612276-10611940 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 110

Conread position: 43-367
Cow position: chr6:41556764-41556449 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 172

Conread position: 44-333
Cow position: chr6:2110961-2111248 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 130, 167

Conread position: 44-371
Cow position: chr6:17556234-17556559 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 201

Conread position: 45-374
Cow position: chr6:7176129-7176455 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 154

Conread position: 47-372
Cow position: chr6:13314594-13314917 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 155

Conread position: 47-374
Cow position: chr6:6944511-6944829 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 134

Conread position: 47-374
Cow position: chr6:61829665-61829339 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 188

Conread position: 48-374
Cow position: chr6:52065687-52066011 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 7

Conread position: 49-304
Cow position: chr6:1109442-1109189 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 198

Conread position: 49-315
Cow position: chr6:26959196-26958927 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 123, 112

Conread position: 50-374
Cow position: chr6:2366833-2367151 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 53-370
Cow position: chr6:529463-529776 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 108

Conread position: 53-371
Cow position: chr6:34843283-34843600 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 193

Conread position: 56-374
Cow position: chr6:16418255-16418572 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 190

Conread position: 56-374
Cow position: chr6:67173983-67173665 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 113, 149

Conread position: 56-375
Cow position: chr6:10598428-10598112 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 147

Conread position: 58-355
Cow position: chr6:44098130-44097836 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 117

Conread position: 58-374
Cow position: chr6:43621156-43620841 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 188

Conread position: 67-358
Cow position: chr6:52557235-52557510 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 126

Conread position: 67-371
Cow position: chr6:14263841-14264141 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 94

Conread position: 67-374
Cow position: chr6:36230110-36230416 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 179

Conread position: 69-370
Cow position: chr6:49761877-49761582 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 105, 19

Conread position: 72-371
Cow position: chr6:41192736-41192439 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 240, 170

Conread position: 82-371
Cow position: chr6:25179784-25180069 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 94-367
Cow position: chr6:3119150-3119425 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 80, 47

Conread position: 98-360
Cow position: chr6:53935253-53935509 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 103

Conread position: 99-373
Cow position: chr6:65868168-65867895 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 133

Conread position: 102-317
Cow position: chr6:19336000-19336211 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 19

Conread position: 102-359
Cow position: chr6:51868368-51868114 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 46

Conread position: 102-371
Cow position: chr6:30269521-30269790 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 141

Conread position: 102-371
Cow position: chr6:34405683-34405414 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 16, 142

Conread position: 102-371
Cow position: chr6:46633499-46633232 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 72, 96

Conread position: 102-374
Cow position: chr6:27939414-27939144 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 15

Conread position: 102-379
Cow position: chr6:50485403-50485678 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 144

Conread position: 103-366
Cow position: chr6:4274449-4274188 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 110

Conread position: 104-369
Cow position: chr6:64252487-64252230 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 86

Conread position: 105-374
Cow position: chr6:43038693-43038957 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 66, 141

Conread position: 112-371
Cow position: chr6:11353802-11354065 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 175

Conread position: 113-374
Cow position: chr6:45723779-45724035 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 199, 62

Conread position: 113-374
Cow position: chr6:68030549-68030289 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 133

Conread position: 117-360
Cow position: chr6:41531959-41531714 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 80

Conread position: 117-374
Cow position: chr6:27151075-27151331 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 55, 116

Conread position: 129-374
Cow position: chr6:1507156-1507400 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 117

Conread position: 129-374
Cow position: chr6:49963598-49963843 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 43, 117

Conread position: 129-374
Cow position: chr6:66188446-66188690 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 117

Conread position: 130-371
Cow position: chr6:11168859-11168620 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 34

Conread position: 132-371
Cow position: chr6:25357516-25357748 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 42, 80

Conread position: 138-345
Cow position: chr6:58016694-58016487 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 106

Conread position: 139-367
Cow position: chr6:46293107-46293318 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 49

Conread position: 149-374
Cow position: chr6:33489720-33489944 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 97

Conread position: 164-374
Cow position: chr6:28399454-28399662 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 8, 82

Conread position: 165-374
Cow position: chr6:2453164-2452956 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 81

Conread position: 171-374
Cow position: chr6:9587846-9587645 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 146, 74

Conread position: 171-374
Cow position: chr6:50113374-50113162 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 175-371
Cow position: chr6:55041820-55042010 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 29

Conread position: 176-371
Cow position: chr6:18970136-18970322 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 176-371
Cow position: chr6:41408710-41408518 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 136, 66

Conread position: 177-374
Cow position: chr6:43048890-43049085 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 68

Conread position: 178-374
Cow position: chr6:20350785-20350979 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 139, 67

Conread position: 179-374
Cow position: chr6:57228895-57228703 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 133, 42

Conread position: 181-371
Cow position: chr6:4389042-4388853 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 20

Conread position: 185-361
Cow position: chr6:42616392-42616220 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 48

Conread position: 186-371
Cow position: chr6:366186-365998 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 55

Conread position: 192-371
Cow position: chr6:65930548-65930371 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 50

Conread position: 192-374
Cow position: chr6:28488288-28488468 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 125, 46

Conread position: 195-371
Cow position: chr6:57182101-57181931 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 50

Conread position: 198-371
Cow position: chr6:38873377-38873548 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 47

Conread position: 246-371
Cow position: chr6:2581641-2581511 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 253-374
Cow position: chr6:8536062-8536186 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 264-371
Cow position: chr6:48350-48459 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 264-374
Cow position: chr6:13850960-13850848 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chr6:17595063-17595175 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chr6:28178442-28178330 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chr6:33996969-33996857 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chr6:38932032-38932144 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chr6:39898172-39898060 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chr6:49826030-49826142 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.