Cow genome map

Conread name: Pig2-33D08

Conread position: 3-306
Cow position: chrX:6766422-6766717 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 23

Conread position: 3-360
Cow position: chrX:22308259-22308605 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 168

Conread position: 3-369
Cow position: chrX:6279285-6279653 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 41

Conread position: 3-371
Cow position: chrX:21415185-21414817 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 238

Conread position: 3-371
Cow position: chrX:29790501-29790866 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 4-369
Cow position: chrX:10440514-10440879 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 168, 22

Conread position: 4-371
Cow position: chrX:21389896-21389528 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 220

Conread position: 4-371
Cow position: chrX:41847213-41847578 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 130

Conread position: 6-367
Cow position: chrX:27450737-27451090 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 20

Conread position: 6-367
Cow position: chrX:41884874-41885223 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 50

Conread position: 6-371
Cow position: chrX:30089735-30090092 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 20

Conread position: 7-310
Cow position: chrX:3211231-3211523 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 141, 34

Conread position: 7-310
Cow position: chrX:25146872-25146574 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 150, 7

Conread position: 7-365
Cow position: chrX:18247663-18247313 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 170, 22

Conread position: 7-367
Cow position: chrX:20801095-20800743 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 7-367
Cow position: chrX:30060202-30059841 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 25

Conread position: 7-371
Cow position: chrX:25451638-25451285 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 15

Conread position: 7-371
Cow position: chrX:36840016-36839663 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 7-374
Cow position: chrX:3582261-3581884 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 119

Conread position: 7-374
Cow position: chrX:5866461-5866093 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 241

Conread position: 7-374
Cow position: chrX:23341678-23342044 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 38

Conread position: 7-374
Cow position: chrX:24174637-24175003 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 197

Conread position: 7-374
Cow position: chrX:29907887-29908255 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 241

Conread position: 8-289
Cow position: chrX:23415382-23415661 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 229

Conread position: 8-295
Cow position: chrX:37832159-37832426 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 8-301
Cow position: chrX:21662349-21662064 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 44

Conread position: 8-308
Cow position: chrX:39559053-39559338 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 24

Conread position: 8-309
Cow position: chrX:21063784-21063489 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 8-310
Cow position: chrX:4482266-4481980 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 21

Conread position: 8-310
Cow position: chrX:39939439-39939740 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 240

Conread position: 8-315
Cow position: chrX:21255088-21254787 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 27

Conread position: 8-315
Cow position: chrX:22125542-22125847 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 155

Conread position: 8-331
Cow position: chrX:11073882-11074189 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 126

Conread position: 8-341
Cow position: chrX:28866699-28867035 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 231

Conread position: 8-341
Cow position: chrX:29858104-29858433 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 154, 38

Conread position: 8-345
Cow position: chrX:41304918-41305253 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 136

Conread position: 8-354
Cow position: chrX:41733878-41734216 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 8-358
Cow position: chrX:43075188-43074846 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 40

Conread position: 8-364
Cow position: chrX:619946-620304 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 160

Conread position: 8-364
Cow position: chrX:3144942-3144587 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 8-367
Cow position: chrX:2382779-2382420 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 35

Conread position: 8-367
Cow position: chrX:13178294-13178652 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 195

Conread position: 8-367
Cow position: chrX:24109292-24109648 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 8-367
Cow position: chrX:35937768-35938111 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 8-367
Cow position: chrX:39352324-39352656 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 308, 15

Conread position: 8-367
Cow position: chrX:40560228-40560584 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 141

Conread position: 8-368
Cow position: chrX:16325216-16325577 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 65

Conread position: 8-371
Cow position: chrX:3649510-3649872 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 141

Conread position: 8-371
Cow position: chrX:6406664-6406306 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 8-371
Cow position: chrX:10866557-10866906 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 8-371
Cow position: chrX:17663606-17663965 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 8-371
Cow position: chrX:18244294-18243943 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 14

Conread position: 8-371
Cow position: chrX:21592604-21592243 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 8-371
Cow position: chrX:22579074-22579437 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 236

Conread position: 8-371
Cow position: chrX:23572503-23572868 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 62

Conread position: 8-371
Cow position: chrX:27590718-27591073 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 204

Conread position: 8-371
Cow position: chrX:28624448-28624804 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 238

Conread position: 8-371
Cow position: chrX:28633163-28633504 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 309, 31

Conread position: 8-371
Cow position: chrX:30163925-30164286 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 129

Conread position: 8-371
Cow position: chrX:30165358-30165710 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 15, 56

Conread position: 8-371
Cow position: chrX:32144955-32145305 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 8-371
Cow position: chrX:34442129-34442478 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 89

Conread position: 8-371
Cow position: chrX:38227998-38228366 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 221

Conread position: 8-371
Cow position: chrX:38852472-38852113 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 8-371
Cow position: chrX:41791399-41791769 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 243

Conread position: 8-371
Cow position: chrX:42733185-42732822 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 239

Conread position: 8-371
Cow position: chrX:44193127-44193486 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 195

Conread position: 8-373
Cow position: chrX:17891860-17891494 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 237

Conread position: 8-373
Cow position: chrX:20652728-20652365 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 157

Conread position: 8-373
Cow position: chrX:21818168-21818506 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 24

Conread position: 8-373
Cow position: chrX:31728774-31728415 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 57

Conread position: 8-373
Cow position: chrX:47000338-47000705 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 220

Conread position: 8-374
Cow position: chrX:2300193-2299842 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 8-374
Cow position: chrX:11744582-11744217 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 196

Conread position: 8-374
Cow position: chrX:16526103-16525737 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 129

Conread position: 8-374
Cow position: chrX:17994772-17994409 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 236

Conread position: 8-374
Cow position: chrX:26447392-26447047 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 146

Conread position: 8-374
Cow position: chrX:26508535-26508180 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 33

Conread position: 8-374
Cow position: chrX:40070297-40070656 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 137

Conread position: 9-314
Cow position: chrX:10301434-10301140 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 9-360
Cow position: chrX:10412661-10413014 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 62

Conread position: 9-374
Cow position: chrX:28605784-28606142 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 8, 113

Conread position: 10-310
Cow position: chrX:4130277-4130585 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 132, 152

Conread position: 10-310
Cow position: chrX:21626383-21626685 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 88

Conread position: 10-315
Cow position: chrX:12465343-12465046 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 153

Conread position: 10-361
Cow position: chrX:31261323-31261673 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 89

Conread position: 10-372
Cow position: chrX:22819385-22819025 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 18

Conread position: 10-372
Cow position: chrX:29879969-29880329 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 234

Conread position: 10-372
Cow position: chrX:37453519-37453162 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 233
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 141

Conread position: 10-373
Cow position: chrX:16035202-16035560 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 92

Conread position: 10-374
Cow position: chrX:16040369-16040732 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 212

Conread position: 10-374
Cow position: chrX:16782591-16782229 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 237

Conread position: 10-374
Cow position: chrX:29759998-29759637 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 10-374
Cow position: chrX:40224931-40225287 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 76

Conread position: 10-379
Cow position: chrX:29029388-29029758 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 58

Conread position: 11-367
Cow position: chrX:1616923-1617279 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 237

Conread position: 11-367
Cow position: chrX:20998967-20999314 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 151

Conread position: 11-372
Cow position: chrX:47992679-47992318 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 129

Conread position: 11-374
Cow position: chrX:2500321-2500683 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 107

Conread position: 11-374
Cow position: chrX:7096768-7096406 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 140

Conread position: 11-374
Cow position: chrX:8434893-8435251 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 10, 90

Conread position: 11-374
Cow position: chrX:12346206-12345843 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 229

Conread position: 11-374
Cow position: chrX:14462623-14462267 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 107

Conread position: 11-374
Cow position: chrX:14782035-14782398 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 236

Conread position: 11-374
Cow position: chrX:16465610-16465254 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 211

Conread position: 11-374
Cow position: chrX:18222723-18222360 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 150

Conread position: 11-374
Cow position: chrX:20356685-20357052 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 245

Conread position: 11-374
Cow position: chrX:24467815-24468176 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 11-374
Cow position: chrX:31496046-31495684 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 180

Conread position: 11-374
Cow position: chrX:37403926-37404282 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 15

Conread position: 14-352
Cow position: chrX:8400257-8400580 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 33

Conread position: 14-369
Cow position: chrX:27071154-27070799 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 14-370
Cow position: chrX:5365288-5365646 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 89, 83

Conread position: 14-371
Cow position: chrX:18193997-18193640 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 233

Conread position: 14-371
Cow position: chrX:28557663-28557317 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 180, 25

Conread position: 14-374
Cow position: chrX:4622647-4623006 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 232

Conread position: 16-238
Cow position: chrX:24441935-24442158 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 158, 197

Conread position: 16-296
Cow position: chrX:19878116-19877845 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 25, 33

Conread position: 16-301
Cow position: chrX:37134329-37134611 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 230

Conread position: 16-310
Cow position: chrX:38330686-38330397 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 130

Conread position: 16-310
Cow position: chrX:44054109-44053829 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 125

Conread position: 16-315
Cow position: chrX:2293296-2293592 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 156, 230

Conread position: 16-315
Cow position: chrX:30135043-30135334 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 125, 95

Conread position: 16-318
Cow position: chrX:30196601-30196303 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 158, 63

Conread position: 16-338
Cow position: chrX:2486328-2486649 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 158, 230

Conread position: 16-338
Cow position: chrX:12178983-12178657 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 112

Conread position: 16-338
Cow position: chrX:39730835-39731154 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 78, 85

Conread position: 16-345
Cow position: chrX:1056083-1056411 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 16-346
Cow position: chrX:22811194-22810864 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 223

Conread position: 16-352
Cow position: chrX:29849325-29849654 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 151

Conread position: 16-352
Cow position: chrX:47380195-47380533 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 37, 12

Conread position: 16-353
Cow position: chrX:29083371-29083035 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 232

Conread position: 16-355
Cow position: chrX:13206256-13205921 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 119

Conread position: 16-355
Cow position: chrX:30136564-30136900 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 86

Conread position: 16-357
Cow position: chrX:5280549-5280887 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 65

Conread position: 16-359
Cow position: chrX:13031348-13031688 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 131

Conread position: 16-360
Cow position: chrX:14458863-14459219 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 158, 341

Conread position: 16-360
Cow position: chrX:15977649-15977992 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-360
Cow position: chrX:28518416-28518759 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-364
Cow position: chrX:5392271-5392616 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 159, 230

Conread position: 16-367
Cow position: chrX:22538729-22539080 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-367
Cow position: chrX:22870126-22869773 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 233

Conread position: 16-367
Cow position: chrX:30172403-30172752 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 16-367
Cow position: chrX:30228810-30229158 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 51

Conread position: 16-367
Cow position: chrX:40693425-40693778 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 229

Conread position: 16-368
Cow position: chrX:23038689-23039033 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 296, 26

Conread position: 16-369
Cow position: chrX:22887964-22887614 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 16-370
Cow position: chrX:3361125-3360772 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 227

Conread position: 16-370
Cow position: chrX:7551497-7551850 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-370
Cow position: chrX:12145406-12145050 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 233

Conread position: 16-370
Cow position: chrX:19608980-19608627 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 231

Conread position: 16-370
Cow position: chrX:27616112-27615765 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 79

Conread position: 16-371
Cow position: chrX:1550269-1549915 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 29

Conread position: 16-371
Cow position: chrX:4905686-4906037 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 111

Conread position: 16-371
Cow position: chrX:5353999-5354350 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 229

Conread position: 16-371
Cow position: chrX:6235552-6235897 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 114

Conread position: 16-371
Cow position: chrX:8590885-8590530 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 16-371
Cow position: chrX:12310085-12310435 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 81

Conread position: 16-371
Cow position: chrX:13405986-13406336 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 81

Conread position: 16-371
Cow position: chrX:14049890-14050243 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 215

Conread position: 16-371
Cow position: chrX:14124942-14125294 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 72

Conread position: 16-371
Cow position: chrX:15621228-15621581 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 113

Conread position: 16-371
Cow position: chrX:16278956-16278606 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 186

Conread position: 16-371
Cow position: chrX:16702975-16702621 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 120

Conread position: 16-371
Cow position: chrX:16711260-16710906 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 120

Conread position: 16-371
Cow position: chrX:16854082-16854415 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 158, 72

Conread position: 16-371
Cow position: chrX:20953837-20953484 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 117

Conread position: 16-371
Cow position: chrX:21226781-21226429 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 196

Conread position: 16-371
Cow position: chrX:21582747-21582393 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chrX:21833173-21832836 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 10

Conread position: 16-371
Cow position: chrX:23022617-23022268 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 186

Conread position: 16-371
Cow position: chrX:23387234-23387583 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 206

Conread position: 16-371
Cow position: chrX:23395911-23395557 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 206

Conread position: 16-371
Cow position: chrX:23452141-23452497 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 222

Conread position: 16-371
Cow position: chrX:24483063-24483412 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 126

Conread position: 16-371
Cow position: chrX:26531277-26530923 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 227

Conread position: 16-371
Cow position: chrX:26755321-26755689 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 239

Conread position: 16-371
Cow position: chrX:27318535-27318181 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 16-371
Cow position: chrX:27977530-27977882 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 196

Conread position: 16-371
Cow position: chrX:29099721-29099369 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chrX:29700648-29700991 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 77

Conread position: 16-371
Cow position: chrX:29916042-29916396 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 63

Conread position: 16-371
Cow position: chrX:30159687-30160039 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 84

Conread position: 16-371
Cow position: chrX:30180623-30180974 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 95

Conread position: 16-371
Cow position: chrX:30455318-30455666 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 38

Conread position: 16-371
Cow position: chrX:32584627-32584980 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 120

Conread position: 16-371
Cow position: chrX:38150992-38150639 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chrX:41156615-41156262 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-372
Cow position: chrX:5248689-5248340 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 81

Conread position: 16-372
Cow position: chrX:24588432-24588785 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 131

Conread position: 16-372
Cow position: chrX:29722523-29722160 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 110, 68

Conread position: 16-373
Cow position: chrX:15151371-15151716 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 194

Conread position: 16-373
Cow position: chrX:39556491-39556839 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 202

Conread position: 16-374
Cow position: chrX:671689-672046 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:2048416-2048059 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:2103709-2103352 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-374
Cow position: chrX:2559656-2560011 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:2579723-2579366 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:2813178-2813536 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:3372549-3372905 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 131

Conread position: 16-374
Cow position: chrX:3417833-3418189 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 63

Conread position: 16-374
Cow position: chrX:3464773-3465127 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 145

Conread position: 16-374
Cow position: chrX:4343055-4342698 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:5289382-5289737 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 139

Conread position: 16-374
Cow position: chrX:5320414-5320767 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 29

Conread position: 16-374
Cow position: chrX:5332129-5332484 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:5334511-5334866 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:5361314-5360957 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:5646800-5647157 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:6372484-6372127 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 206

Conread position: 16-374
Cow position: chrX:6454001-6453644 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:6581238-6580882 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 72

Conread position: 16-374
Cow position: chrX:6870260-6870615 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 230

Conread position: 16-374
Cow position: chrX:7755209-7754853 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 119

Conread position: 16-374
Cow position: chrX:8641091-8640735 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 11

Conread position: 16-374
Cow position: chrX:9011631-9011278 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 72

Conread position: 16-374
Cow position: chrX:9128360-9128002 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 30

Conread position: 16-374
Cow position: chrX:9169310-9169658 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 168

Conread position: 16-374
Cow position: chrX:9642128-9642485 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:10059769-10059413 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:10445111-10445468 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 144

Conread position: 16-374
Cow position: chrX:10528482-10528837 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 230

Conread position: 16-374
Cow position: chrX:11146029-11146387 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:11409030-11409387 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:11461692-11462046 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 187

Conread position: 16-374
Cow position: chrX:11499472-11499827 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:11976142-11976498 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 81

Conread position: 16-374
Cow position: chrX:12307458-12307815 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:12360192-12359834 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 230

Conread position: 16-374
Cow position: chrX:14598150-14597793 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:14801516-14801871 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 30

Conread position: 16-374
Cow position: chrX:15260315-15260668 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:16085354-16085711 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:16808510-16808866 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 206

Conread position: 16-374
Cow position: chrX:17054873-17054516 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 231

Conread position: 16-374
Cow position: chrX:17290484-17290130 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-374
Cow position: chrX:17782804-17782447 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:18023688-18024045 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:18488410-18488767 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:18656501-18656858 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 72

Conread position: 16-374
Cow position: chrX:19399082-19398725 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:19473855-19474201 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 156, 118

Conread position: 16-374
Cow position: chrX:20020883-20020528 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:21343699-21343342 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 236

Conread position: 16-374
Cow position: chrX:21685923-21685566 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 80

Conread position: 16-374
Cow position: chrX:21768108-21767747 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 80

Conread position: 16-374
Cow position: chrX:21793895-21793537 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 16-374
Cow position: chrX:22077038-22077393 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-374
Cow position: chrX:22564383-22564736 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 128

Conread position: 16-374
Cow position: chrX:23986554-23986197 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 227

Conread position: 16-374
Cow position: chrX:24413334-24412974 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 158, 226

Conread position: 16-374
Cow position: chrX:24769553-24769909 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 119

Conread position: 16-374
Cow position: chrX:25289375-25289732 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-374
Cow position: chrX:26230454-26230811 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:26275442-26275086 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 144

Conread position: 16-374
Cow position: chrX:26760264-26760621 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 223

Conread position: 16-374
Cow position: chrX:27305233-27304876 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 85

Conread position: 16-374
Cow position: chrX:27754733-27754375 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 53

Conread position: 16-374
Cow position: chrX:27759011-27758656 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 51

Conread position: 16-374
Cow position: chrX:28503640-28503283 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:28588275-28587919 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 227

Conread position: 16-374
Cow position: chrX:28753036-28753389 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 69

Conread position: 16-374
Cow position: chrX:29225782-29225425 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:29912643-29912288 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 144

Conread position: 16-374
Cow position: chrX:30053164-30053521 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:30199688-30200045 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:30836691-30836334 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:30964682-30965039 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:31978537-31978893 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:32063867-32064220 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 67

Conread position: 16-374
Cow position: chrX:32643790-32643433 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:33685435-33685078 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chrX:34761370-34761013 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-374
Cow position: chrX:35533158-35532803 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 229

Conread position: 16-374
Cow position: chrX:36195396-36195043 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 144

Conread position: 16-374
Cow position: chrX:36535431-36535782 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 72

Conread position: 16-374
Cow position: chrX:36729688-36729331 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-374
Cow position: chrX:37080215-37080567 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 66

Conread position: 16-374
Cow position: chrX:37852443-37852085 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 233

Conread position: 16-374
Cow position: chrX:38230963-38231320 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:39185477-39185120 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 206

Conread position: 16-374
Cow position: chrX:39548703-39548346 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:39560348-39560712 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 151

Conread position: 16-374
Cow position: chrX:39713855-39713498 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chrX:42222471-42222822 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 32

Conread position: 16-374
Cow position: chrX:46296964-46296609 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 63

Conread position: 16-376
Cow position: chrX:22838576-22838217 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 17-359
Cow position: chrX:23134882-23134553 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 157, 71

Conread position: 17-367
Cow position: chrX:31202144-31201795 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 112

Conread position: 17-371
Cow position: chrX:323218-322866 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 197

Conread position: 17-371
Cow position: chrX:24292376-24292715 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 157, 74

Conread position: 17-372
Cow position: chrX:2008407-2008748 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 7

Conread position: 17-374
Cow position: chrX:16086820-16087176 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 222

Conread position: 17-374
Cow position: chrX:16359704-16360060 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 229

Conread position: 18-371
Cow position: chrX:18950434-18950786 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 228

Conread position: 18-371
Cow position: chrX:24317124-24316766 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 111

Conread position: 19-374
Cow position: chrX:38961549-38961903 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 227

Conread position: 21-360
Cow position: chrX:32329505-32329170 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 5

Conread position: 22-374
Cow position: chrX:7485105-7484754 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 224

Conread position: 23-309
Cow position: chrX:1947653-1947927 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 78

Conread position: 23-358
Cow position: chrX:28133394-28133063 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 23-361
Cow position: chrX:35287721-35287385 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 8

Conread position: 23-373
Cow position: chrX:4767987-4767647 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 119

Conread position: 26-375
Cow position: chrX:6044179-6044505 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 24

Conread position: 27-318
Cow position: chrX:4995904-4995620 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 191

Conread position: 27-360
Cow position: chrX:33537866-33537545 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 152, 14

Conread position: 27-367
Cow position: chrX:25817529-25817863 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 64

Conread position: 28-310
Cow position: chrX:37118203-37117922 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 192

Conread position: 28-359
Cow position: chrX:34222058-34221721 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 10, 270

Conread position: 28-365
Cow position: chrX:7572678-7572347 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 63

Conread position: 28-371
Cow position: chrX:29288286-29287948 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 28-374
Cow position: chrX:20503930-20503590 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 13

Conread position: 30-367
Cow position: chrX:28879305-28879627 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 30-374
Cow position: chrX:25573639-25573300 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 144, 67

Conread position: 30-375
Cow position: chrX:5649113-5649455 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 142, 150

Conread position: 31-364
Cow position: chrX:2649061-2649393 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 81

Conread position: 31-371
Cow position: chrX:22118207-22118544 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 36

Conread position: 31-374
Cow position: chrX:45373819-45374160 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 32-288
Cow position: chrX:20790253-20790505 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 140, 19

Conread position: 32-366
Cow position: chrX:7277231-7276917 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 59, 13

Conread position: 32-369
Cow position: chrX:15306585-15306921 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 166, 19

Conread position: 32-371
Cow position: chrX:2479335-2479678 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 102

Conread position: 32-371
Cow position: chrX:20675156-20674818 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 214

Conread position: 32-373
Cow position: chrX:22809541-22809213 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 123, 181

Conread position: 32-373
Cow position: chrX:35024347-35024017 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 41

Conread position: 33-345
Cow position: chrX:18455482-18455794 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 192

Conread position: 36-365
Cow position: chrX:3406057-3406372 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 210

Conread position: 36-367
Cow position: chrX:4407167-4406838 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 210

Conread position: 37-371
Cow position: chrX:17889578-17889901 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 17

Conread position: 37-374
Cow position: chrX:22493311-22492981 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 9

Conread position: 38-369
Cow position: chrX:40496304-40496625 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 114

Conread position: 39-372
Cow position: chrX:27983073-27983402 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 27, 15

Conread position: 42-374
Cow position: chrX:3155307-3155633 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 94

Conread position: 43-376
Cow position: chrX:2705074-2705407 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 129, 75

Conread position: 44-374
Cow position: chrX:20792412-20792086 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 98

Conread position: 47-310
Cow position: chrX:41879643-41879906 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 178

Conread position: 47-374
Cow position: chrX:24346322-24345996 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 199

Conread position: 47-374
Cow position: chrX:33763418-33763092 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 199

Conread position: 51-365
Cow position: chrX:26622553-26622851 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 84

Conread position: 52-374
Cow position: chrX:15175284-15175602 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 44

Conread position: 52-374
Cow position: chrX:28058590-28058269 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 194

Conread position: 53-374
Cow position: chrX:34094973-34094653 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 193

Conread position: 54-371
Cow position: chrX:15121896-15122210 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 13

Conread position: 56-372
Cow position: chrX:28647006-28647321 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 75

Conread position: 56-374
Cow position: chrX:8482711-8482395 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 190

Conread position: 56-374
Cow position: chrX:13928478-13928795 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 116, 190

Conread position: 61-374
Cow position: chrX:39698020-39697715 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 117, 26

Conread position: 62-374
Cow position: chrX:22612660-22612350 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 5

Conread position: 67-369
Cow position: chrX:6201782-6201485 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 71

Conread position: 67-371
Cow position: chrX:6655783-6656068 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 67-371
Cow position: chrX:9095895-9095593 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 107, 62

Conread position: 67-374
Cow position: chrX:24280173-24279864 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 174

Conread position: 69-371
Cow position: chrX:23280275-23279977 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 153

Conread position: 70-372
Cow position: chrX:40184323-40184022 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 173

Conread position: 73-272
Cow position: chrX:45042677-45042479 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 77, 172

Conread position: 88-374
Cow position: chrX:9763840-9764124 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 12

Conread position: 97-374
Cow position: chrX:24447177-24446901 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 149

Conread position: 102-309
Cow position: chrX:44874285-44874486 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 70, 26

Conread position: 102-371
Cow position: chrX:27498047-27497781 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 144

Conread position: 102-374
Cow position: chrX:7120825-7120554 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 144

Conread position: 102-374
Cow position: chrX:26618342-26618071 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 70, 120

Conread position: 103-371
Cow position: chrX:3652883-3652624 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 127, 18

Conread position: 103-374
Cow position: chrX:16803650-16803919 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 119

Conread position: 109-373
Cow position: chrX:38999042-38998789 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 66, 26

Conread position: 112-371
Cow position: chrX:5375069-5375327 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 62, 136

Conread position: 113-367
Cow position: chrX:9261614-9261368 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 75

Conread position: 127-374
Cow position: chrX:5841504-5841262 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 32

Conread position: 130-373
Cow position: chrX:40827921-40828158 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 93

Conread position: 137-374
Cow position: chrX:29930209-29930445 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 109

Conread position: 147-371
Cow position: chrX:12996737-12996960 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 97

Conread position: 149-374
Cow position: chrX:24321456-24321681 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 98

Conread position: 151-367
Cow position: chrX:29047284-29047069 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 81

Conread position: 151-371
Cow position: chrX:20742022-20741803 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 95

Conread position: 151-374
Cow position: chrX:30435448-30435671 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 96

Conread position: 152-358
Cow position: chrX:10438739-10438942 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 164, 21

Conread position: 152-371
Cow position: chrX:9227733-9227952 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 96

Conread position: 155-374
Cow position: chrX:2185390-2185173 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 82

Conread position: 156-374
Cow position: chrX:37815342-37815126 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 5

Conread position: 156-376
Cow position: chrX:21750081-21750298 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 88

Conread position: 170-367
Cow position: chrX:33830185-33829998 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 145, 28

Conread position: 170-371
Cow position: chrX:6854569-6854763 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 149, 72

Conread position: 171-371
Cow position: chrX:24928194-24928392 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 146, 74

Conread position: 173-371
Cow position: chrX:5294200-5294397 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 55

Conread position: 175-337
Cow position: chrX:28765964-28766124 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 145, 66

Conread position: 176-374
Cow position: chrX:22616224-22616424 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 73

Conread position: 177-366
Cow position: chrX:42010082-42009909 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 177-374
Cow position: chrX:21892650-21892455 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 68

Conread position: 177-374
Cow position: chrX:24734803-24734611 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 69

Conread position: 178-348
Cow position: chrX:2932861-2933029 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 134, 67

Conread position: 178-371
Cow position: chrX:37488098-37487901 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 182-374
Cow position: chrX:8104370-8104559 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 40

Conread position: 185-374
Cow position: chrX:27595092-27595279 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 132, 60

Conread position: 194-374
Cow position: chrX:16046098-16045920 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 51

Conread position: 195-371
Cow position: chrX:9535667-9535493 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 48

Conread position: 195-371
Cow position: chrX:9837039-9836865 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 48

Conread position: 199-374
Cow position: chrX:29170661-29170834 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 113, 46

Conread position: 201-371
Cow position: chrX:13415327-13415492 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 30

Conread position: 253-371
Cow position: chrX:11950700-11950820 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 254-367
Cow position: chrX:7177784-7177669 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 264-371
Cow position: chrX:27029189-27029081 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 264-374
Cow position: chrX:15349154-15349266 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chrX:18463410-18463298 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chrX:25292020-25292132 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 267-374
Cow position: chrX:5298184-5298293 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.