Cow genome map

Conread name: Pig2-34G17

Conread position: 126-334
Cow position: chr1:4573489-4573280 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 23

Conread position: 132-363
Cow position: chr1:8532252-8532483 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 14

Conread position: 138-366
Cow position: chr1:71946419-71946642 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 138-366
Cow position: chr1:89344867-89344637 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 8

Conread position: 146-364
Cow position: chr1:31765438-31765665 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 51, 178

Conread position: 147-274
Cow position: chr1:20667794-20667921 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 147-321
Cow position: chr1:31234979-31235158 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 147-351
Cow position: chr1:100551917-100551713 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 86

Conread position: 147-355
Cow position: chr1:71295358-71295569 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 163

Conread position: 147-366
Cow position: chr1:56225414-56225206 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 148-277
Cow position: chr1:24445681-24445811 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 70

Conread position: 148-277
Cow position: chr1:86110784-86110915 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 148-279
Cow position: chr1:3243885-3243754 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 92

Conread position: 148-296
Cow position: chr1:43340665-43340824 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 148-300
Cow position: chr1:4414261-4414413 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 148-302
Cow position: chr1:12464719-12464871 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 148-302
Cow position: chr1:98311015-98310854 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 148-304
Cow position: chr1:71643712-71643873 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 148-312
Cow position: chr1:52956200-52956042 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 148-322
Cow position: chr1:26201166-26200993 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 148-322
Cow position: chr1:89076682-89076863 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 145

Conread position: 148-331
Cow position: chr1:71818511-71818699 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 148-334
Cow position: chr1:71079011-71079193 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 95, 60

Conread position: 148-335
Cow position: chr1:94404159-94403975 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 153
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 166, 102

Conread position: 148-339
Cow position: chr1:84239166-84239352 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 172, 84

Conread position: 148-340
Cow position: chr1:92369679-92369470 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 148-342
Cow position: chr1:57395983-57396177 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 164, 78

Conread position: 148-343
Cow position: chr1:100450234-100450439 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 148-345
Cow position: chr1:47233532-47233726 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 175, 99

Conread position: 148-345
Cow position: chr1:57635408-57635216 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 148-346
Cow position: chr1:74084248-74084441 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 107

Conread position: 148-347
Cow position: chr1:75967378-75967183 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 171, 113

Conread position: 148-350
Cow position: chr1:3790119-3790312 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 176, 73

Conread position: 148-350
Cow position: chr1:47008978-47008771 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 102, 87

Conread position: 148-350
Cow position: chr1:97806735-97806536 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 172, 139

Conread position: 148-354
Cow position: chr1:4291107-4290898 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 190

Conread position: 148-354
Cow position: chr1:12595957-12596161 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 99

Conread position: 148-354
Cow position: chr1:75744807-75744600 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 148-355
Cow position: chr1:80900064-80899847 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 148-358
Cow position: chr1:79165138-79165356 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 148-361
Cow position: chr1:54478271-54478056 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 166, 212

Conread position: 148-361
Cow position: chr1:56711672-56711883 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 92

Conread position: 148-363
Cow position: chr1:26930024-26930242 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 102, 191

Conread position: 148-364
Cow position: chr1:5409667-5409884 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 88

Conread position: 148-364
Cow position: chr1:10778513-10778304 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 148-364
Cow position: chr1:33331141-33331343 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 99, 42

Conread position: 148-364
Cow position: chr1:61564743-61564521 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 148-364
Cow position: chr1:84255710-84255485 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 206

Conread position: 148-365
Cow position: chr1:41004416-41004638 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 164

Conread position: 148-366
Cow position: chr1:724684-724464 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 105, 70

Conread position: 148-366
Cow position: chr1:4589527-4589753 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 74

Conread position: 148-366
Cow position: chr1:20125560-20125339 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 94

Conread position: 148-366
Cow position: chr1:21093039-21092819 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 0

Conread position: 148-366
Cow position: chr1:36998141-36997925 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 5

Conread position: 148-366
Cow position: chr1:39418174-39418390 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 105

Conread position: 148-366
Cow position: chr1:52496730-52496504 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 148-366
Cow position: chr1:53425122-53424920 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 87

Conread position: 148-366
Cow position: chr1:63434859-63435075 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 64

Conread position: 148-366
Cow position: chr1:69539644-69539425 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 210, 139

Conread position: 148-366
Cow position: chr1:73960652-73960428 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 148-366
Cow position: chr1:81613336-81613113 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 148-366
Cow position: chr1:89349909-89349705 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 172, 81

Conread position: 148-366
Cow position: chr1:94212181-94211962 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 148-366
Cow position: chr1:97755463-97755254 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 148-366
Cow position: chr1:98551663-98551445 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 95, 139

Conread position: 149-309
Cow position: chr1:24542636-24542794 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 84

Conread position: 149-322
Cow position: chr1:55705304-55705481 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 149-340
Cow position: chr1:51531713-51531527 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 86

Conread position: 149-345
Cow position: chr1:71253607-71253806 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 149-347
Cow position: chr1:70538553-70538350 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 149-364
Cow position: chr1:68253537-68253321 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 108, 86

Conread position: 149-366
Cow position: chr1:57575813-57576034 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 190

Conread position: 150-346
Cow position: chr1:99118334-99118133 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 18

Conread position: 151-344
Cow position: chr1:6881280-6881475 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 177, 0

Conread position: 151-355
Cow position: chr1:78810983-78810775 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 152-336
Cow position: chr1:95056998-95056813 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 170, 0

Conread position: 152-363
Cow position: chr1:99609311-99609098 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 207

Conread position: 153-317
Cow position: chr1:43872389-43872553 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 143

Conread position: 153-364
Cow position: chr1:100770807-100771005 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 81

Conread position: 154-366
Cow position: chr1:82504915-82504695 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 155-366
Cow position: chr1:8349375-8349581 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 79

Conread position: 157-297
Cow position: chr1:28563629-28563771 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 161-295
Cow position: chr1:94261476-94261347 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 41, 32

Conread position: 161-354
Cow position: chr1:37646071-37646261 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 159, 97

Conread position: 163-366
Cow position: chr1:92198701-92198501 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 14

Conread position: 170-304
Cow position: chr1:99792740-99792602 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 170-366
Cow position: chr1:53397916-53397712 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 177-364
Cow position: chr1:51983502-51983323 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.