Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 128-354 |
| Cow position: | chr12:32714967-32714735 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 146-351 |
| Cow position: | chr12:42167552-42167344 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 146-366 |
| Cow position: | chr12:26868890-26869113 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 56, 170 |
| Conread position: | 147-322 |
| Cow position: | chr12:27562926-27563109 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 147-350 |
| Cow position: | chr12:6720226-6720021 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 102, 164 |
| Conread position: | 147-354 |
| Cow position: | chr12:41473994-41473791 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 173, 106 |
| Conread position: | 147-366 |
| Cow position: | chr12:5135048-5134822 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 147-366 |
| Cow position: | chr12:21486487-21486279 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 147-366 |
| Cow position: | chr12:34673438-34673646 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 148-280 |
| Cow position: | chr12:38511936-38512072 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-310 |
| Cow position: | chr12:5940250-5940083 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 148-311 |
| Cow position: | chr12:4182788-4182957 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-312 |
| Cow position: | chr12:24107643-24107800 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 148-330 |
| Cow position: | chr12:25320824-25320642 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 172, 87 |
| Conread position: | 148-334 |
| Cow position: | chr12:37728042-37727862 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 172, 55 |
| Conread position: | 148-334 |
| Cow position: | chr12:37732882-37733062 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 175, 55 |
| Conread position: | 148-337 |
| Cow position: | chr12:6226748-6226937 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 148-342 |
| Cow position: | chr12:6164123-6164322 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-344 |
| Cow position: | chr12:17031517-17031326 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 172, 113 |
| Conread position: | 148-345 |
| Cow position: | chr12:19715138-19715323 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 148-349 |
| Cow position: | chr12:1848632-1848838 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-355 |
| Cow position: | chr12:8943318-8943526 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 148-356 |
| Cow position: | chr12:4008375-4008590 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 101, 152 |
| Conread position: | 148-364 |
| Cow position: | chr12:18011338-18011119 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 148-364 |
| Cow position: | chr12:19664626-19664830 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 54, 78 |
| Conread position: | 148-364 |
| Cow position: | chr12:19691332-19691550 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 167 |
| Conread position: | 148-365 |
| Cow position: | chr12:45814357-45814580 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 148-366 |
| Cow position: | chr12:1518389-1518616 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 148-366 |
| Cow position: | chr12:3880350-3880576 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr12:17472324-17472537 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 172, 39 |
| Conread position: | 148-366 |
| Cow position: | chr12:30753625-30753410 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 148-366 |
| Cow position: | chr12:37770778-37770554 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 149-320 |
| Cow position: | chr12:25177682-25177864 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 149-333 |
| Cow position: | chr12:18388382-18388566 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 176, 12 |
| Conread position: | 149-345 |
| Cow position: | chr12:5905955-5905761 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 43 |
| Conread position: | 149-354 |
| Cow position: | chr12:3579185-3578977 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 107, 175 |
| Conread position: | 149-366 |
| Cow position: | chr12:34148448-34148668 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 116 |
| Conread position: | 150-289 |
| Cow position: | chr12:13156578-13156434 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 150-347 |
| Cow position: | chr12:20777023-20777227 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 150-354 |
| Cow position: | chr12:30170568-30170362 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 99, 80 |
| Conread position: | 151-353 |
| Cow position: | chr12:7000705-7000893 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 152-336 |
| Cow position: | chr12:41214426-41214605 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 152-339 |
| Cow position: | chr12:4134569-4134375 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 155-322 |
| Cow position: | chr12:43942372-43942208 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 161-343 |
| Cow position: | chr12:25805221-25805404 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 161-364 |
| Cow position: | chr12:42181249-42181456 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 57 |
| Conread position: | 161-366 |
| Cow position: | chr12:19420040-19420249 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 169-366 |
| Cow position: | chr12:12976296-12976503 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.