Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 131-288 |
| Cow position: | chr13:6540279-6540128 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 146-271 |
| Cow position: | chr13:7790058-7790182 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 146-332 |
| Cow position: | chr13:52197679-52197870 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 146-351 |
| Cow position: | chr13:23167054-23166848 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 146-357 |
| Cow position: | chr13:37069392-37069604 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 146-364 |
| Cow position: | chr13:16292584-16292808 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 146-366 |
| Cow position: | chr13:16269966-16270199 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 56, 150 |
| Conread position: | 146-366 |
| Cow position: | chr13:34941609-34941393 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 146-366 |
| Cow position: | chr13:61976922-61976701 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 160 |
| Conread position: | 147-345 |
| Cow position: | chr13:21904707-21904902 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 147-356 |
| Cow position: | chr13:37521336-37521126 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 148-286 |
| Cow position: | chr13:49503486-49503345 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 148-303 |
| Cow position: | chr13:24230254-24230413 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 148-309 |
| Cow position: | chr13:20679384-20679551 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 148-323 |
| Cow position: | chr13:36877118-36877292 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 148-325 |
| Cow position: | chr13:12202411-12202587 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 148-332 |
| Cow position: | chr13:12207088-12207273 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 148-334 |
| Cow position: | chr13:54093789-54093972 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 148-338 |
| Cow position: | chr13:17815813-17816007 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 148-341 |
| Cow position: | chr13:48251941-48251753 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 148-345 |
| Cow position: | chr13:4664821-4664618 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 148-345 |
| Cow position: | chr13:55674164-55673962 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-351 |
| Cow position: | chr13:21235641-21235436 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 39 |
| Conread position: | 148-353 |
| Cow position: | chr13:35659798-35660004 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 148-355 |
| Cow position: | chr13:45023167-45022955 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-355 |
| Cow position: | chr13:52199131-52199342 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 99, 117 |
| Conread position: | 148-361 |
| Cow position: | chr13:2414073-2414285 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 148-363 |
| Cow position: | chr13:18852125-18852334 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 171, 85 |
| Conread position: | 148-364 |
| Cow position: | chr13:563098-562875 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-364 |
| Cow position: | chr13:15869167-15869382 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 177, 55 |
| Conread position: | 148-364 |
| Cow position: | chr13:15958666-15958883 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 148-364 |
| Cow position: | chr13:17021684-17021458 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-364 |
| Cow position: | chr13:17292088-17291869 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 148-364 |
| Cow position: | chr13:25249112-25248882 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 58, 194 |
| Conread position: | 148-364 |
| Cow position: | chr13:38484876-38485092 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 109 |
| Conread position: | 148-366 |
| Cow position: | chr13:971848-971634 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 85 |
| Conread position: | 148-366 |
| Cow position: | chr13:6974205-6974429 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 148-366 |
| Cow position: | chr13:12546866-12546643 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 53, 172 |
| Conread position: | 148-366 |
| Cow position: | chr13:15041429-15041208 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-366 |
| Cow position: | chr13:15172366-15172145 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 105, 204 |
| Conread position: | 148-366 |
| Cow position: | chr13:18243906-18244119 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 148-366 |
| Cow position: | chr13:18835237-18835450 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 99 |
| Conread position: | 148-366 |
| Cow position: | chr13:36771375-36771158 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 148-366 |
| Cow position: | chr13:55295578-55295362 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 91 |
| Conread position: | 148-366 |
| Cow position: | chr13:60690682-60690455 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 49, 194 |
| Conread position: | 149-364 |
| Cow position: | chr13:2774173-2774383 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 165, 117 |
| Conread position: | 150-309 |
| Cow position: | chr13:19022322-19022484 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 111 |
| Conread position: | 150-348 |
| Cow position: | chr13:25062455-25062656 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 101, 82 |
| Conread position: | 151-366 |
| Cow position: | chr13:46181839-46182053 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 152-352 |
| Cow position: | chr13:25926839-25927042 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 152-363 |
| Cow position: | chr13:890123-889920 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 168, 87 |
| Conread position: | 152-365 |
| Cow position: | chr13:18166782-18166993 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 81 |
| Conread position: | 154-364 |
| Cow position: | chr13:3003492-3003709 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 155-366 |
| Cow position: | chr13:7663372-7663165 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 159, 106 |
| Conread position: | 161-363 |
| Cow position: | chr13:50681752-50681547 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 161-366 |
| Cow position: | chr13:152012-152206 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 161-366 |
| Cow position: | chr13:11820652-11820841 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 160, 52 |
| Conread position: | 161-366 |
| Cow position: | chr13:46525388-46525180 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 111 |
Show alignments to all cow chromosomes.