Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 126-279 |
| Cow position: | chr15:38103766-38103610 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 88 |
| Conread position: | 127-366 |
| Cow position: | chr15:16112527-16112770 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 128-364 |
| Cow position: | chr15:7430104-7430344 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 226 |
| Conread position: | 131-277 |
| Cow position: | chr15:32324074-32323927 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 145-322 |
| Cow position: | chr15:21908081-21908257 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 149 |
| Conread position: | 146-340 |
| Cow position: | chr15:29353408-29353214 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 146-354 |
| Cow position: | chr15:19771278-19771483 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 62, 88 |
| Conread position: | 146-366 |
| Cow position: | chr15:6385505-6385727 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 61, 183 |
| Conread position: | 146-366 |
| Cow position: | chr15:6806525-6806299 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 146-366 |
| Cow position: | chr15:16307559-16307784 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 146-366 |
| Cow position: | chr15:31160462-31160683 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 146-366 |
| Cow position: | chr15:32979893-32979666 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 147-325 |
| Cow position: | chr15:17763055-17763226 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 147-352 |
| Cow position: | chr15:9494149-9493940 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 147-364 |
| Cow position: | chr15:43827626-43827407 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 203 |
| Conread position: | 147-366 |
| Cow position: | chr15:5568179-5567953 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 148-265 |
| Cow position: | chr15:43750662-43750781 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-310 |
| Cow position: | chr15:11995878-11995714 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-319 |
| Cow position: | chr15:10845868-10846042 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-322 |
| Cow position: | chr15:12304790-12304964 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-322 |
| Cow position: | chr15:50322744-50322918 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-334 |
| Cow position: | chr15:21522935-21523126 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-338 |
| Cow position: | chr15:39599590-39599780 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 85, 100 |
| Conread position: | 148-344 |
| Cow position: | chr15:38883300-38883502 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 148-345 |
| Cow position: | chr15:1083227-1083033 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 137 |
| Conread position: | 148-350 |
| Cow position: | chr15:23768116-23767913 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 148-350 |
| Cow position: | chr15:40957727-40957931 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 148-352 |
| Cow position: | chr15:12785572-12785790 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 148-355 |
| Cow position: | chr15:40009502-40009293 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 148-355 |
| Cow position: | chr15:50302332-50302543 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 128, 140 |
| Conread position: | 148-359 |
| Cow position: | chr15:4093784-4093564 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 148-364 |
| Cow position: | chr15:21389020-21388801 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 171 |
| Conread position: | 148-364 |
| Cow position: | chr15:22532386-22532607 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 148-364 |
| Cow position: | chr15:36259454-36259225 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 148-365 |
| Cow position: | chr15:23487019-23486806 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 172, 61 |
| Conread position: | 148-365 |
| Cow position: | chr15:42143004-42143216 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 148-366 |
| Cow position: | chr15:4485289-4485512 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 54, 133 |
| Conread position: | 148-366 |
| Cow position: | chr15:10335905-10336119 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 148-366 |
| Cow position: | chr15:11363029-11362810 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 171, 99 |
| Conread position: | 148-366 |
| Cow position: | chr15:13387228-13387449 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 190 |
| Conread position: | 148-366 |
| Cow position: | chr15:17870137-17869926 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 172, 82 |
| Conread position: | 148-366 |
| Cow position: | chr15:18720458-18720682 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 148-366 |
| Cow position: | chr15:20391126-20390922 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 148-366 |
| Cow position: | chr15:30047394-30047168 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr15:33306258-33306474 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 100, 85 |
| Conread position: | 148-366 |
| Cow position: | chr15:49738897-49738679 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 149-338 |
| Cow position: | chr15:52778380-52778188 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 149-342 |
| Cow position: | chr15:6586567-6586369 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 149-366 |
| Cow position: | chr15:13515518-13515737 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 100, 169 |
| Conread position: | 150-355 |
| Cow position: | chr15:16823088-16823293 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 130, 108 |
| Conread position: | 151-355 |
| Cow position: | chr15:21893933-21894139 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 151-364 |
| Cow position: | chr15:29340217-29340429 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 169, 9 |
| Conread position: | 152-350 |
| Cow position: | chr15:22168210-22168410 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 153-366 |
| Cow position: | chr15:33976535-33976325 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 172, 94 |
| Conread position: | 155-356 |
| Cow position: | chr15:38846257-38846454 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 155-365 |
| Cow position: | chr15:5234848-5234638 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 155-366 |
| Cow position: | chr15:16639936-16640151 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 161-323 |
| Cow position: | chr15:33243307-33243482 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 161-342 |
| Cow position: | chr15:29792750-29792568 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 159, 0 |
Show alignments to all cow chromosomes.