Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 126-318 |
| Cow position: | chr16:31117653-31117851 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 126-352 |
| Cow position: | chr16:7075876-7075654 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 130-321 |
| Cow position: | chr16:26676727-26676923 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 131-355 |
| Cow position: | chr16:14758692-14758471 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 147 |
| Conread position: | 134-338 |
| Cow position: | chr16:33704760-33704547 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 136-365 |
| Cow position: | chr16:7082780-7083011 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 11, 114 |
| Conread position: | 136-366 |
| Cow position: | chr16:16177769-16177537 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 143-342 |
| Cow position: | chr16:11615287-11615483 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 177, 110 |
| Conread position: | 146-276 |
| Cow position: | chr16:53037681-53037812 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 146-312 |
| Cow position: | chr16:15504577-15504750 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 146-330 |
| Cow position: | chr16:47336674-47336487 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 146-366 |
| Cow position: | chr16:7011012-7010791 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 146-366 |
| Cow position: | chr16:9497333-9497552 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 146-366 |
| Cow position: | chr16:35343527-35343754 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 147-286 |
| Cow position: | chr16:10352812-10352669 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 147-322 |
| Cow position: | chr16:30037050-30037228 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 158 |
| Conread position: | 147-348 |
| Cow position: | chr16:22868231-22868438 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 147-364 |
| Cow position: | chr16:8621174-8620973 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 147-366 |
| Cow position: | chr16:13689606-13689384 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 147-366 |
| Cow position: | chr16:14106587-14106367 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 177, 114 |
| Conread position: | 148-250 |
| Cow position: | chr16:23762065-23761963 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-257 |
| Cow position: | chr16:17945460-17945355 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 148-281 |
| Cow position: | chr16:45554383-45554245 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 148-287 |
| Cow position: | chr16:17626871-17626731 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 148-302 |
| Cow position: | chr16:10592375-10592226 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 148-312 |
| Cow position: | chr16:32781306-32781138 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-317 |
| Cow position: | chr16:53595580-53595751 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 130 |
| Conread position: | 148-320 |
| Cow position: | chr16:45535121-45534951 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 148-322 |
| Cow position: | chr16:5896359-5896185 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-322 |
| Cow position: | chr16:8812142-8812321 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 148-322 |
| Cow position: | chr16:32327591-32327418 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 148-325 |
| Cow position: | chr16:25839559-25839380 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 101, 136 |
| Conread position: | 148-352 |
| Cow position: | chr16:5741184-5740990 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 148-352 |
| Cow position: | chr16:38708890-38709091 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 102 |
| Conread position: | 148-352 |
| Cow position: | chr16:39704898-39705105 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 148-355 |
| Cow position: | chr16:44973436-44973228 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 136 |
| Conread position: | 148-355 |
| Cow position: | chr16:53891841-53892048 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 177, 200 |
| Conread position: | 148-360 |
| Cow position: | chr16:47662654-47662441 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 54, 89 |
| Conread position: | 148-361 |
| Cow position: | chr16:17745774-17745560 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 55 |
| Conread position: | 148-364 |
| Cow position: | chr16:11775108-11775328 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-364 |
| Cow position: | chr16:28192010-28191790 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 148-364 |
| Cow position: | chr16:53627487-53627700 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 177, 105 |
| Conread position: | 148-365 |
| Cow position: | chr16:24148098-24147877 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 148-366 |
| Cow position: | chr16:4503223-4503001 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 148-366 |
| Cow position: | chr16:5726863-5726651 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 148-366 |
| Cow position: | chr16:28205643-28205866 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 148-366 |
| Cow position: | chr16:29159072-29158853 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 60, 167 |
| Conread position: | 148-366 |
| Cow position: | chr16:33482378-33482159 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 148-366 |
| Cow position: | chr16:35188195-35187975 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 148-366 |
| Cow position: | chr16:37062455-37062671 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 148-366 |
| Cow position: | chr16:39385348-39385122 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 148-366 |
| Cow position: | chr16:40333386-40333600 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 101, 49 |
| Conread position: | 148-366 |
| Cow position: | chr16:42078900-42079118 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 93, 173 |
| Conread position: | 148-366 |
| Cow position: | chr16:43537683-43537459 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 148-366 |
| Cow position: | chr16:49126248-49126462 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 148-366 |
| Cow position: | chr16:53224873-53225084 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 173, 55 |
| Conread position: | 148-366 |
| Cow position: | chr16:56150241-56150034 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 149-345 |
| Cow position: | chr16:41752633-41752831 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 149-366 |
| Cow position: | chr16:51578478-51578698 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 150-364 |
| Cow position: | chr16:48494617-48494833 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 151-345 |
| Cow position: | chr16:18205898-18205713 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 169, 79 |
| Conread position: | 151-352 |
| Cow position: | chr16:42092446-42092641 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 168, 78 |
| Conread position: | 151-364 |
| Cow position: | chr16:15960354-15960571 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 152-344 |
| Cow position: | chr16:23472684-23472493 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 152-353 |
| Cow position: | chr16:4372558-4372762 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 153-301 |
| Cow position: | chr16:42444091-42443940 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 145 |
| Conread position: | 153-351 |
| Cow position: | chr16:43308626-43308825 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 53, 169 |
| Conread position: | 153-366 |
| Cow position: | chr16:29766273-29766065 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 157-280 |
| Cow position: | chr16:20205389-20205260 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 161-366 |
| Cow position: | chr16:1548947-1549153 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 165-355 |
| Cow position: | chr16:8315261-8315441 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.