Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 126-364 |
| Cow position: | chr17:30718416-30718655 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 136-309 |
| Cow position: | chr17:34207824-34208000 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 146-326 |
| Cow position: | chr17:24490511-24490323 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 146-366 |
| Cow position: | chr17:11618569-11618342 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 147-319 |
| Cow position: | chr17:12536486-12536658 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-333 |
| Cow position: | chr17:21628462-21628277 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 147-360 |
| Cow position: | chr17:35126690-35126483 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 173, 100 |
| Conread position: | 147-363 |
| Cow position: | chr17:20839578-20839793 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 155 |
| Conread position: | 147-364 |
| Cow position: | chr17:26765000-26764778 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 148-283 |
| Cow position: | chr17:4968094-4967956 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 148-283 |
| Cow position: | chr17:31037399-31037534 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-287 |
| Cow position: | chr17:7142847-7142706 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-287 |
| Cow position: | chr17:20928896-20928752 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 125 |
| Conread position: | 148-335 |
| Cow position: | chr17:1035616-1035811 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 86 |
| Conread position: | 148-337 |
| Cow position: | chr17:32278924-32279116 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 148-337 |
| Cow position: | chr17:38647039-38646859 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 148-344 |
| Cow position: | chr17:33933767-33933953 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 170, 82 |
| Conread position: | 148-345 |
| Cow position: | chr17:21312829-21313018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 148-348 |
| Cow position: | chr17:20835578-20835373 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-351 |
| Cow position: | chr17:41290041-41290240 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 99, 12 |
| Conread position: | 148-352 |
| Cow position: | chr17:1020580-1020791 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 148-355 |
| Cow position: | chr17:8079298-8079090 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 103, 147 |
| Conread position: | 148-364 |
| Cow position: | chr17:23101227-23101446 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 148-364 |
| Cow position: | chr17:25189269-25189044 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-365 |
| Cow position: | chr17:24973933-24973713 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 148-366 |
| Cow position: | chr17:3503562-3503340 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 169, 61 |
| Conread position: | 148-366 |
| Cow position: | chr17:5895929-5896150 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 148-366 |
| Cow position: | chr17:11101821-11102032 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 172, 12 |
| Conread position: | 148-366 |
| Cow position: | chr17:13244059-13244264 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 172, 84 |
| Conread position: | 148-366 |
| Cow position: | chr17:15664652-15664431 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 114 |
| Conread position: | 148-366 |
| Cow position: | chr17:18495539-18495745 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 172, 83 |
| Conread position: | 148-366 |
| Cow position: | chr17:20361847-20361625 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 148-366 |
| Cow position: | chr17:21003847-21004069 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 148-366 |
| Cow position: | chr17:21293059-21293283 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 148-366 |
| Cow position: | chr17:22032709-22032921 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 101, 156 |
| Conread position: | 148-366 |
| Cow position: | chr17:24077385-24077168 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 145 |
| Conread position: | 148-366 |
| Cow position: | chr17:27667207-27667432 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 148-366 |
| Cow position: | chr17:32989457-32989255 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 172, 25 |
| Conread position: | 148-366 |
| Cow position: | chr17:40771818-40771590 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 149-302 |
| Cow position: | chr17:20990214-20990367 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-366 |
| Cow position: | chr17:12216092-12216317 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 149-366 |
| Cow position: | chr17:20022536-20022755 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 150-338 |
| Cow position: | chr17:33290836-33291019 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 150-345 |
| Cow position: | chr17:24761248-24761440 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 151-345 |
| Cow position: | chr17:21738897-21739101 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 151-355 |
| Cow position: | chr17:7132472-7132682 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 151-366 |
| Cow position: | chr17:21874328-21874554 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 128 |
| Conread position: | 152-366 |
| Cow position: | chr17:24883590-24883803 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 52 |
| Conread position: | 152-366 |
| Cow position: | chr17:32651597-32651378 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 153-329 |
| Cow position: | chr17:5006511-5006692 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 155-345 |
| Cow position: | chr17:11156515-11156710 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 155-348 |
| Cow position: | chr17:5767889-5767694 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 155-366 |
| Cow position: | chr17:29084163-29083968 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 199, 6 |
| Conread position: | 157-363 |
| Cow position: | chr17:14848565-14848757 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 163, 37 |
| Conread position: | 165-353 |
| Cow position: | chr17:37482108-37482313 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.