Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 123-364 |
| Cow position: | chr20:23952630-23952388 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 136-366 |
| Cow position: | chr20:19237074-19236854 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 72, 171 |
| Conread position: | 136-366 |
| Cow position: | chr20:19313067-19313301 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 117, 67 |
| Conread position: | 138-352 |
| Cow position: | chr20:28982691-28982476 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 145-283 |
| Cow position: | chr20:14433440-14433580 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 146-362 |
| Cow position: | chr20:11340813-11341037 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 146-364 |
| Cow position: | chr20:19410379-19410599 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 185 |
| Conread position: | 146-365 |
| Cow position: | chr20:40127350-40127571 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 91 |
| Conread position: | 147-362 |
| Cow position: | chr20:28605188-28604973 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 202, 88 |
| Conread position: | 147-364 |
| Cow position: | chr20:8112802-8112580 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 147-365 |
| Cow position: | chr20:18320807-18321032 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 147-366 |
| Cow position: | chr20:12996026-12996245 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 55 |
| Conread position: | 147-366 |
| Cow position: | chr20:33144568-33144789 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 192 |
| Conread position: | 148-245 |
| Cow position: | chr20:11392679-11392582 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-286 |
| Cow position: | chr20:8308002-8307858 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 148-299 |
| Cow position: | chr20:7438870-7439017 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 148-322 |
| Cow position: | chr20:38414986-38415162 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 148-325 |
| Cow position: | chr20:13994797-13994615 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 148-341 |
| Cow position: | chr20:35907068-35907257 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 148-342 |
| Cow position: | chr20:38578776-38578966 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 148-343 |
| Cow position: | chr20:8020881-8020682 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 148-344 |
| Cow position: | chr20:11482151-11482353 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-345 |
| Cow position: | chr20:7442144-7442339 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 168, 54 |
| Conread position: | 148-345 |
| Cow position: | chr20:14735659-14735462 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-345 |
| Cow position: | chr20:14759677-14759879 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 77 |
| Conread position: | 148-345 |
| Cow position: | chr20:39398469-39398274 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 148-363 |
| Cow position: | chr20:3331304-3331527 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 148-364 |
| Cow position: | chr20:10469049-10468837 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 176, 138 |
| Conread position: | 148-364 |
| Cow position: | chr20:17904143-17903922 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 148-364 |
| Cow position: | chr20:41977398-41977188 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 148-365 |
| Cow position: | chr20:40256954-40256734 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 116 |
| Conread position: | 148-366 |
| Cow position: | chr20:6240538-6240765 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr20:14011957-14011734 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr20:14806869-14806648 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 148-366 |
| Cow position: | chr20:17733791-17734009 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 148-366 |
| Cow position: | chr20:20312763-20312973 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 109 |
| Conread position: | 148-366 |
| Cow position: | chr20:24069787-24069579 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 148-366 |
| Cow position: | chr20:31746645-31746859 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 148-366 |
| Cow position: | chr20:36207788-36207570 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 149-299 |
| Cow position: | chr20:7211022-7210867 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 149-321 |
| Cow position: | chr20:32084099-32084274 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 100, 156 |
| Conread position: | 149-350 |
| Cow position: | chr20:24135288-24135485 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 170, 64 |
| Conread position: | 149-352 |
| Cow position: | chr20:26996516-26996312 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 102, 169 |
| Conread position: | 150-322 |
| Cow position: | chr20:11043521-11043687 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 151-364 |
| Cow position: | chr20:13967279-13967492 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 151-366 |
| Cow position: | chr20:6258080-6258299 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 167 |
| Conread position: | 151-366 |
| Cow position: | chr20:13269607-13269389 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 167 |
| Conread position: | 151-366 |
| Cow position: | chr20:19751288-19751075 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 168, 84 |
| Conread position: | 152-287 |
| Cow position: | chr20:9701597-9701731 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 156-299 |
| Cow position: | chr20:30710669-30710820 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 160-366 |
| Cow position: | chr20:22235286-22235076 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 161-277 |
| Cow position: | chr20:9730056-9729939 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 161-348 |
| Cow position: | chr20:30817505-30817319 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 159, 84 |
| Conread position: | 161-366 |
| Cow position: | chr20:22313188-22313396 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 153, 122 |
| Conread position: | 167-261 |
| Cow position: | chr20:22978285-22978188 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.