Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 130-366 |
| Cow position: | chr21:82102-81855 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 146-354 |
| Cow position: | chr21:11137640-11137853 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 146-366 |
| Cow position: | chr21:3920205-3920427 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 170, 162 |
| Conread position: | 146-366 |
| Cow position: | chr21:4189842-4189619 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 146-366 |
| Cow position: | chr21:44114130-44114342 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 147-331 |
| Cow position: | chr21:17183928-17183741 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 147-345 |
| Cow position: | chr21:35569376-35569578 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 135, 43 |
| Conread position: | 147-353 |
| Cow position: | chr21:24222533-24222740 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 97, 144 |
| Conread position: | 147-354 |
| Cow position: | chr21:13898190-13897988 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 147-366 |
| Cow position: | chr21:21216138-21216356 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 54 |
| Conread position: | 147-366 |
| Cow position: | chr21:28626245-28626026 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 102, 88 |
| Conread position: | 147-366 |
| Cow position: | chr21:42913740-42913961 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 148-287 |
| Cow position: | chr21:20260317-20260456 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-288 |
| Cow position: | chr21:12461966-12462107 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 148-296 |
| Cow position: | chr21:7825173-7825320 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 148-307 |
| Cow position: | chr21:10633636-10633796 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-317 |
| Cow position: | chr21:27624713-27624547 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 148-331 |
| Cow position: | chr21:45375626-45375436 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 95, 56 |
| Conread position: | 148-332 |
| Cow position: | chr21:42024126-42023943 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 172, 81 |
| Conread position: | 148-334 |
| Cow position: | chr21:17175155-17174957 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 148-340 |
| Cow position: | chr21:14452240-14452041 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 148-345 |
| Cow position: | chr21:11644966-11645163 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 173, 87 |
| Conread position: | 148-345 |
| Cow position: | chr21:42135616-42135818 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-355 |
| Cow position: | chr21:29484983-29484780 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 148-355 |
| Cow position: | chr21:37361472-37361678 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 148-364 |
| Cow position: | chr21:28512533-28512321 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 174, 48 |
| Conread position: | 148-364 |
| Cow position: | chr21:33210206-33209985 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-365 |
| Cow position: | chr21:911963-912182 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 148-366 |
| Cow position: | chr21:724882-725105 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 206 |
| Conread position: | 148-366 |
| Cow position: | chr21:9416252-9416027 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-366 |
| Cow position: | chr21:11640026-11639805 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 101, 135 |
| Conread position: | 148-366 |
| Cow position: | chr21:23683552-23683335 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 125, 102 |
| Conread position: | 148-366 |
| Cow position: | chr21:23822171-23821953 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 171, 153 |
| Conread position: | 148-366 |
| Cow position: | chr21:34390971-34391185 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 99 |
| Conread position: | 148-366 |
| Cow position: | chr21:36297494-36297264 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr21:36795604-36795385 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 175, 91 |
| Conread position: | 148-366 |
| Cow position: | chr21:41957172-41957389 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 172, 114 |
| Conread position: | 148-366 |
| Cow position: | chr21:41974371-41974594 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr21:43240871-43240643 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-366 |
| Cow position: | chr21:47802253-47802477 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 149-299 |
| Cow position: | chr21:14515854-14515697 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 149-364 |
| Cow position: | chr21:12617140-12616926 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 98 |
| Conread position: | 149-365 |
| Cow position: | chr21:4795228-4795008 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 150-366 |
| Cow position: | chr21:2367336-2367125 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 170, 97 |
| Conread position: | 150-366 |
| Cow position: | chr21:42348672-42348893 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 150-366 |
| Cow position: | chr21:48251025-48251245 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 151-333 |
| Cow position: | chr21:13488523-13488337 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 151-333 |
| Cow position: | chr21:46829269-46829451 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 169, 91 |
| Conread position: | 151-339 |
| Cow position: | chr21:40589484-40589671 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 44 |
| Conread position: | 151-346 |
| Cow position: | chr21:31253545-31253340 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 151-363 |
| Cow position: | chr21:39403535-39403750 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 151-366 |
| Cow position: | chr21:10727278-10727066 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 151-366 |
| Cow position: | chr21:41155864-41155647 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 100, 185 |
| Conread position: | 157-366 |
| Cow position: | chr21:44825890-44826091 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 160-366 |
| Cow position: | chr21:24797679-24797480 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 161-366 |
| Cow position: | chr21:4998495-4998700 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 165-364 |
| Cow position: | chr21:30592317-30592511 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 165-366 |
| Cow position: | chr21:35897645-35897836 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 155, 78 |
| Conread position: | 170-363 |
| Cow position: | chr21:14126030-14125834 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 73, 65 |
Show alignments to all cow chromosomes.