Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 136-366 |
| Cow position: | chr28:11752184-11752418 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 139-365 |
| Cow position: | chr28:17637911-17638137 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 9, 210 |
| Conread position: | 146-312 |
| Cow position: | chr28:18625177-18625004 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 146-345 |
| Cow position: | chr28:4057929-4057734 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 173, 50 |
| Conread position: | 146-355 |
| Cow position: | chr28:26533497-26533280 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 146-364 |
| Cow position: | chr28:7512639-7512863 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 146-366 |
| Cow position: | chr28:30303246-30303466 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 147-364 |
| Cow position: | chr28:20124730-20124515 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 103 |
| Conread position: | 147-365 |
| Cow position: | chr28:13267733-13267508 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 147-366 |
| Cow position: | chr28:22323215-22322992 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 147-366 |
| Cow position: | chr28:34082070-34082291 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 148-303 |
| Cow position: | chr28:5437142-5437301 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 148-308 |
| Cow position: | chr28:9108392-9108227 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-312 |
| Cow position: | chr28:5188458-5188620 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 54, 74 |
| Conread position: | 148-327 |
| Cow position: | chr28:3077935-3077759 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 148-330 |
| Cow position: | chr28:9285428-9285615 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-343 |
| Cow position: | chr28:25249299-25249105 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 172, 45 |
| Conread position: | 148-344 |
| Cow position: | chr28:27428689-27428501 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 175, 62 |
| Conread position: | 148-345 |
| Cow position: | chr28:8348705-8348905 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 101, 7 |
| Conread position: | 148-348 |
| Cow position: | chr28:27218270-27218065 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-349 |
| Cow position: | chr28:14649294-14649091 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 148-352 |
| Cow position: | chr28:4016478-4016276 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 148-353 |
| Cow position: | chr28:19079897-19080107 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 207 |
| Conread position: | 148-354 |
| Cow position: | chr28:25424354-25424564 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 101, 63 |
| Conread position: | 148-355 |
| Cow position: | chr28:24996643-24996851 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 148-362 |
| Cow position: | chr28:23530815-23530595 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 148-364 |
| Cow position: | chr28:5204138-5203931 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 148-364 |
| Cow position: | chr28:12430553-12430338 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 172, 88 |
| Conread position: | 148-364 |
| Cow position: | chr28:23410379-23410596 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 148-366 |
| Cow position: | chr28:3256743-3256528 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 101, 170 |
| Conread position: | 148-366 |
| Cow position: | chr28:3914657-3914437 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 148-366 |
| Cow position: | chr28:4282544-4282765 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 148-366 |
| Cow position: | chr28:5771312-5771093 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 166, 88 |
| Conread position: | 148-366 |
| Cow position: | chr28:7549114-7549335 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 148-366 |
| Cow position: | chr28:14933912-14933689 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-366 |
| Cow position: | chr28:14998010-14997791 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 148-366 |
| Cow position: | chr28:19222650-19222867 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 199 |
| Conread position: | 148-366 |
| Cow position: | chr28:20313220-20313002 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 148-366 |
| Cow position: | chr28:22132872-22132653 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 148-366 |
| Cow position: | chr28:28164032-28163823 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 149-364 |
| Cow position: | chr28:15374877-15375096 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 149-366 |
| Cow position: | chr28:10533989-10534202 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 150-366 |
| Cow position: | chr28:3751258-3751046 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 152-365 |
| Cow position: | chr28:22170774-22170992 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 153-364 |
| Cow position: | chr28:16919216-16919435 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 155-286 |
| Cow position: | chr28:4834903-4835038 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 161-344 |
| Cow position: | chr28:16370143-16370325 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 161-366 |
| Cow position: | chr28:20759987-20760197 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 167-364 |
| Cow position: | chr28:16388558-16388372 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 171-364 |
| Cow position: | chr28:5128803-5128998 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 78, 132 |
| Conread position: | 172-366 |
| Cow position: | chr28:15063413-15063612 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.