Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 121-336 |
| Cow position: | chr29:25737453-25737667 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 203, 27 |
| Conread position: | 126-345 |
| Cow position: | chr29:2522529-2522319 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 197, 5 |
| Conread position: | 126-365 |
| Cow position: | chr29:21000605-21000360 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 160 |
| Conread position: | 126-365 |
| Cow position: | chr29:24345489-24345743 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 132-291 |
| Cow position: | chr29:11053906-11054058 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 146-286 |
| Cow position: | chr29:9718829-9718972 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 146-302 |
| Cow position: | chr29:14484603-14484761 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 146-307 |
| Cow position: | chr29:5109263-5109431 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 146-366 |
| Cow position: | chr29:2414873-2415091 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 146-366 |
| Cow position: | chr29:2744331-2744552 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 147-333 |
| Cow position: | chr29:36183221-36183029 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 137 |
| Conread position: | 147-366 |
| Cow position: | chr29:6844688-6844909 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 148-258 |
| Cow position: | chr29:23243941-23244051 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-286 |
| Cow position: | chr29:25092051-25091910 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 99, 132 |
| Conread position: | 148-300 |
| Cow position: | chr29:22778238-22778395 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-303 |
| Cow position: | chr29:31489260-31489103 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 148-323 |
| Cow position: | chr29:24103606-24103785 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 148-325 |
| Cow position: | chr29:13639431-13639605 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 148-342 |
| Cow position: | chr29:8926526-8926715 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 148-343 |
| Cow position: | chr29:12784017-12784212 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 148-344 |
| Cow position: | chr29:37292718-37292519 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 148-345 |
| Cow position: | chr29:43311855-43312054 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-354 |
| Cow position: | chr29:22175626-22175425 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 109, 62 |
| Conread position: | 148-355 |
| Cow position: | chr29:9686063-9686270 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 172, 113 |
| Conread position: | 148-355 |
| Cow position: | chr29:26615783-26615998 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 148-361 |
| Cow position: | chr29:25333525-25333728 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 113, 12 |
| Conread position: | 148-363 |
| Cow position: | chr29:3396045-3395833 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 175, 95 |
| Conread position: | 148-364 |
| Cow position: | chr29:6293535-6293745 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 148-364 |
| Cow position: | chr29:22162314-22162535 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 163, 99 |
| Conread position: | 148-365 |
| Cow position: | chr29:13372604-13372384 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-365 |
| Cow position: | chr29:32799769-32799986 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 148-366 |
| Cow position: | chr29:9709634-9709419 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 148-366 |
| Cow position: | chr29:16657629-16657411 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 60, 134 |
| Conread position: | 148-366 |
| Cow position: | chr29:24952627-24952406 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 101, 160 |
| Conread position: | 148-366 |
| Cow position: | chr29:28868575-28868351 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 148-366 |
| Cow position: | chr29:31926350-31926570 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 54, 139 |
| Conread position: | 148-366 |
| Cow position: | chr29:42364075-42364294 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 132 |
| Conread position: | 148-366 |
| Cow position: | chr29:44233011-44233229 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 171, 90 |
| Conread position: | 150-278 |
| Cow position: | chr29:32211119-32211251 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 150-305 |
| Cow position: | chr29:28446319-28446478 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 150-329 |
| Cow position: | chr29:14615320-14615499 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 164 |
| Conread position: | 151-322 |
| Cow position: | chr29:16309678-16309515 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 151-337 |
| Cow position: | chr29:11562551-11562363 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 83, 79 |
| Conread position: | 151-364 |
| Cow position: | chr29:36530803-36530585 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 151-366 |
| Cow position: | chr29:28197069-28197288 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 155-275 |
| Cow position: | chr29:4334660-4334539 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 155-338 |
| Cow position: | chr29:13458991-13458810 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 173 |
| Conread position: | 161-364 |
| Cow position: | chr29:26289161-26289364 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 43 |
Show alignments to all cow chromosomes.