Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 125-366 |
| Cow position: | chr7:27509725-27509481 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 127-355 |
| Cow position: | chr7:43184804-43184578 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 138-345 |
| Cow position: | chr7:62553432-62553227 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 138-366 |
| Cow position: | chr7:55706393-55706611 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 146-353 |
| Cow position: | chr7:64228909-64229119 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 196 |
| Conread position: | 146-365 |
| Cow position: | chr7:32283903-32283677 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 146-366 |
| Cow position: | chr7:53269179-53268955 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 94 |
| Conread position: | 147-250 |
| Cow position: | chr7:38263655-38263550 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 147-308 |
| Cow position: | chr7:3773285-3773448 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 102, 77 |
| Conread position: | 147-345 |
| Cow position: | chr7:51319782-51319584 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 64 |
| Conread position: | 147-355 |
| Cow position: | chr7:60153431-60153210 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 147-360 |
| Cow position: | chr7:34422285-34422492 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 147-365 |
| Cow position: | chr7:30931992-30932210 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 117 |
| Conread position: | 147-365 |
| Cow position: | chr7:39988388-39988173 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 147-366 |
| Cow position: | chr7:58301956-58302182 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 148-252 |
| Cow position: | chr7:5238085-5238191 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 148-274 |
| Cow position: | chr7:42593297-42593417 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 148-280 |
| Cow position: | chr7:9800336-9800205 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 148-290 |
| Cow position: | chr7:30816306-30816446 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 148-294 |
| Cow position: | chr7:1376123-1375983 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 148-321 |
| Cow position: | chr7:12201940-12202106 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 148-322 |
| Cow position: | chr7:24564631-24564811 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-322 |
| Cow position: | chr7:59168254-59168086 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 148-325 |
| Cow position: | chr7:64135482-64135659 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 148-328 |
| Cow position: | chr7:34412291-34412468 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 122 |
| Conread position: | 148-331 |
| Cow position: | chr7:28917070-28916885 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 171 |
| Conread position: | 148-338 |
| Cow position: | chr7:3336569-3336758 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 148-338 |
| Cow position: | chr7:40303282-40303473 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 148-339 |
| Cow position: | chr7:31170969-31171162 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 82 |
| Conread position: | 148-342 |
| Cow position: | chr7:20537345-20537150 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 148-342 |
| Cow position: | chr7:57162134-57161936 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 148-343 |
| Cow position: | chr7:31881659-31881474 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 177, 110 |
| Conread position: | 148-345 |
| Cow position: | chr7:3256371-3256559 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 148-345 |
| Cow position: | chr7:24718547-24718750 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 54, 157 |
| Conread position: | 148-345 |
| Cow position: | chr7:38060446-38060649 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-349 |
| Cow position: | chr7:23619103-23619305 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 148-355 |
| Cow position: | chr7:40067642-40067432 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-356 |
| Cow position: | chr7:20780135-20779924 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 170 |
| Conread position: | 148-356 |
| Cow position: | chr7:26838639-26838438 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 148-361 |
| Cow position: | chr7:10069730-10069939 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 148-361 |
| Cow position: | chr7:11714444-11714658 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 65, 211 |
| Conread position: | 148-363 |
| Cow position: | chr7:58862904-58863113 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 148-364 |
| Cow position: | chr7:4138747-4138958 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 165, 99 |
| Conread position: | 148-364 |
| Cow position: | chr7:14536298-14536506 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 135 |
| Conread position: | 148-364 |
| Cow position: | chr7:40008803-40008583 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-364 |
| Cow position: | chr7:62193549-62193329 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 148-365 |
| Cow position: | chr7:23646589-23646367 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 148-365 |
| Cow position: | chr7:54712401-54712180 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 101, 184 |
| Conread position: | 148-366 |
| Cow position: | chr7:13593749-13593538 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 148-366 |
| Cow position: | chr7:14542076-14542288 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 148-366 |
| Cow position: | chr7:23657814-23657595 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 148-366 |
| Cow position: | chr7:26631831-26632048 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 148-366 |
| Cow position: | chr7:27079609-27079397 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 148-366 |
| Cow position: | chr7:27136484-27136260 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 148-366 |
| Cow position: | chr7:28584229-28584010 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 65 |
| Conread position: | 148-366 |
| Cow position: | chr7:32819798-32819575 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr7:38082138-38081919 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 148-366 |
| Cow position: | chr7:40324376-40324152 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 148-366 |
| Cow position: | chr7:45593022-45592805 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 95, 55 |
| Conread position: | 148-366 |
| Cow position: | chr7:49648347-49648126 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 87, 125 |
| Conread position: | 149-312 |
| Cow position: | chr7:23477343-23477499 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 82, 99 |
| Conread position: | 149-343 |
| Cow position: | chr7:23936090-23935902 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 94, 48 |
| Conread position: | 149-364 |
| Cow position: | chr7:35275099-35275306 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 149-364 |
| Cow position: | chr7:49751108-49750889 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 138, 95 |
| Conread position: | 150-282 |
| Cow position: | chr7:6820879-6820736 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 150-366 |
| Cow position: | chr7:10448800-10449020 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 142 |
| Conread position: | 150-366 |
| Cow position: | chr7:56820591-56820808 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 151-304 |
| Cow position: | chr7:61790375-61790529 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 105 |
| Conread position: | 151-344 |
| Cow position: | chr7:56838515-56838712 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 151-364 |
| Cow position: | chr7:22624124-22624340 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 151-364 |
| Cow position: | chr7:41328061-41328266 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 185, 90 |
| Conread position: | 151-366 |
| Cow position: | chr7:14520061-14520274 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 57, 95 |
| Conread position: | 152-364 |
| Cow position: | chr7:60121493-60121281 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 155-287 |
| Cow position: | chr7:40051780-40051916 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 157-366 |
| Cow position: | chr7:40579478-40579264 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 161-334 |
| Cow position: | chr7:14712231-14712398 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 159, 74 |
| Conread position: | 161-366 |
| Cow position: | chr7:20534845-20534645 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 163-313 |
| Cow position: | chr7:35793083-35792934 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 164-361 |
| Cow position: | chr7:26012394-26012196 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 172 |
| Conread position: | 165-345 |
| Cow position: | chr7:25867541-25867721 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 168-343 |
| Cow position: | chr7:40406621-40406448 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 152, 99 |
| Conread position: | 169-366 |
| Cow position: | chr7:53806856-53807052 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 44, 93 |
| Conread position: | 171-365 |
| Cow position: | chr7:39325700-39325507 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 76 |
Show alignments to all cow chromosomes.