Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 125-271 |
| Cow position: | chr8:35596785-35596931 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 126-333 |
| Cow position: | chr8:39144724-39144527 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 128-246 |
| Cow position: | chr8:35563303-35563184 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 136-299 |
| Cow position: | chr8:1011943-1011776 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 145-325 |
| Cow position: | chr8:53214372-53214550 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 146-309 |
| Cow position: | chr8:39181813-39181983 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 146-345 |
| Cow position: | chr8:13660986-13660787 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 103, 9 |
| Conread position: | 146-353 |
| Cow position: | chr8:34799628-34799418 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 205 |
| Conread position: | 146-360 |
| Cow position: | chr8:20563809-20564024 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 146-364 |
| Cow position: | chr8:8015669-8015893 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 168 |
| Conread position: | 146-366 |
| Cow position: | chr8:29765210-29764987 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 146-366 |
| Cow position: | chr8:47549980-47550204 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 147-354 |
| Cow position: | chr8:18057703-18057487 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 70, 180 |
| Conread position: | 147-355 |
| Cow position: | chr8:34400897-34400690 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 147-366 |
| Cow position: | chr8:554234-554454 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 147-366 |
| Cow position: | chr8:50709004-50708779 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 148-250 |
| Cow position: | chr8:54061225-54061123 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-261 |
| Cow position: | chr8:46616364-46616251 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-275 |
| Cow position: | chr8:37192320-37192195 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 148-279 |
| Cow position: | chr8:5893894-5893763 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-294 |
| Cow position: | chr8:39174295-39174445 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 148-304 |
| Cow position: | chr8:32093829-32093677 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 109, 114 |
| Conread position: | 148-309 |
| Cow position: | chr8:47679368-47679204 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 148-312 |
| Cow position: | chr8:31297218-31297055 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 148-317 |
| Cow position: | chr8:54302979-54302818 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 148-319 |
| Cow position: | chr8:4591122-4591293 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-332 |
| Cow position: | chr8:20683921-20683738 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 148-335 |
| Cow position: | chr8:29625019-29625201 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 169, 36 |
| Conread position: | 148-335 |
| Cow position: | chr8:53587513-53587705 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 148-338 |
| Cow position: | chr8:2897667-2897861 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 82 |
| Conread position: | 148-339 |
| Cow position: | chr8:16030263-16030459 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 130 |
| Conread position: | 148-342 |
| Cow position: | chr8:17669788-17669985 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 101, 160 |
| Conread position: | 148-350 |
| Cow position: | chr8:39630725-39630518 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-352 |
| Cow position: | chr8:5484922-5485134 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 148-355 |
| Cow position: | chr8:4940358-4940566 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 148-359 |
| Cow position: | chr8:42762480-42762687 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 172, 109 |
| Conread position: | 148-364 |
| Cow position: | chr8:3704571-3704356 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 57, 83 |
| Conread position: | 148-364 |
| Cow position: | chr8:24371766-24371983 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 166, 54 |
| Conread position: | 148-364 |
| Cow position: | chr8:32854867-32855072 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 166, 26 |
| Conread position: | 148-366 |
| Cow position: | chr8:9229930-9230153 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 172 |
| Conread position: | 148-366 |
| Cow position: | chr8:15391211-15391420 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 148-366 |
| Cow position: | chr8:16938506-16938718 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 164, 71 |
| Conread position: | 148-366 |
| Cow position: | chr8:20837076-20836859 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 148-366 |
| Cow position: | chr8:21961200-21960982 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 165 |
| Conread position: | 148-366 |
| Cow position: | chr8:23609167-23608951 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 148-366 |
| Cow position: | chr8:24201857-24201635 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 148-366 |
| Cow position: | chr8:24471601-24471379 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 148-366 |
| Cow position: | chr8:24513194-24513406 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 74 |
| Conread position: | 148-366 |
| Cow position: | chr8:33974508-33974306 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 148-366 |
| Cow position: | chr8:38665477-38665259 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 148-366 |
| Cow position: | chr8:38780660-38780442 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 148-366 |
| Cow position: | chr8:38789513-38789296 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 148-366 |
| Cow position: | chr8:38893959-38893739 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 31 |
| Conread position: | 148-366 |
| Cow position: | chr8:40032862-40033086 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 148-366 |
| Cow position: | chr8:47461820-47461596 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-366 |
| Cow position: | chr8:57389238-57389020 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 172, 99 |
| Conread position: | 149-343 |
| Cow position: | chr8:2953582-2953389 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 171, 103 |
| Conread position: | 149-354 |
| Cow position: | chr8:17103470-17103675 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-355 |
| Cow position: | chr8:10176191-10176401 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 149-366 |
| Cow position: | chr8:32133222-32132984 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 74 |
| Conread position: | 150-344 |
| Cow position: | chr8:29030150-29030342 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 147, 98 |
| Conread position: | 150-361 |
| Cow position: | chr8:59250681-59250463 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 151-322 |
| Cow position: | chr8:36465155-36464982 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 151-355 |
| Cow position: | chr8:42607330-42607526 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 172, 94 |
| Conread position: | 151-364 |
| Cow position: | chr8:9705554-9705340 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 151-365 |
| Cow position: | chr8:19642419-19642203 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 153-360 |
| Cow position: | chr8:21268578-21268785 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 108 |
| Conread position: | 154-366 |
| Cow position: | chr8:9917825-9917624 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 156-364 |
| Cow position: | chr8:6232955-6233164 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 161-322 |
| Cow position: | chr8:35504298-35504459 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 161-364 |
| Cow position: | chr8:40888261-40888462 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 111, 164 |
| Conread position: | 161-366 |
| Cow position: | chr8:23111132-23111342 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 162-355 |
| Cow position: | chr8:54269073-54269254 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 164-319 |
| Cow position: | chr8:24905434-24905274 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 165-365 |
| Cow position: | chr8:4796715-4796525 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 175-283 |
| Cow position: | chr8:6951455-6951343 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 180-366 |
| Cow position: | chr8:42112880-42113074 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 69, 31 |
Show alignments to all cow chromosomes.