Cow genome map
| Conread name: | Pig2-34G17 |
| Conread position: | 106-322 |
| Cow position: | chr9:34902063-34901852 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 106-366 |
| Cow position: | chr9:2398579-2398324 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 126-283 |
| Cow position: | chr9:9654246-9654092 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 128-365 |
| Cow position: | chr9:22361083-22361319 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 143-366 |
| Cow position: | chr9:22616709-22616927 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 146-287 |
| Cow position: | chr9:6338882-6339030 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 146-304 |
| Cow position: | chr9:52131104-52131263 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 129 |
| Conread position: | 147-356 |
| Cow position: | chr9:4928715-4928927 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 171 |
| Conread position: | 147-366 |
| Cow position: | chr9:55256463-55256242 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 100, 139 |
| Conread position: | 148-283 |
| Cow position: | chr9:28354609-28354742 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 148-287 |
| Cow position: | chr9:31292777-31292916 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-312 |
| Cow position: | chr9:9595866-9595701 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 148-322 |
| Cow position: | chr9:11068382-11068206 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 148-334 |
| Cow position: | chr9:4128695-4128507 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 148-338 |
| Cow position: | chr9:24887288-24887477 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 148-340 |
| Cow position: | chr9:10877783-10877584 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-344 |
| Cow position: | chr9:11319545-11319358 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 108, 153 |
| Conread position: | 148-345 |
| Cow position: | chr9:17740859-17740656 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 148-345 |
| Cow position: | chr9:49764745-49764943 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 148-354 |
| Cow position: | chr9:35306029-35305823 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 148-355 |
| Cow position: | chr9:35533864-35533655 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 148-360 |
| Cow position: | chr9:10308920-10308705 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 148-363 |
| Cow position: | chr9:64050472-64050255 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 58, 189 |
| Conread position: | 148-364 |
| Cow position: | chr9:10118576-10118357 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 148-364 |
| Cow position: | chr9:22227994-22227779 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 175, 97 |
| Conread position: | 148-364 |
| Cow position: | chr9:23388589-23388370 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 148-365 |
| Cow position: | chr9:1952180-1951963 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-366 |
| Cow position: | chr9:5219080-5218872 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 148-366 |
| Cow position: | chr9:5433726-5433939 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 148-366 |
| Cow position: | chr9:11299602-11299389 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 113 |
| Conread position: | 148-366 |
| Cow position: | chr9:19714163-19714378 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 148-366 |
| Cow position: | chr9:26390856-26391072 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 55 |
| Conread position: | 148-366 |
| Cow position: | chr9:28983273-28983492 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 49 |
| Conread position: | 148-366 |
| Cow position: | chr9:31640234-31640010 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 148-366 |
| Cow position: | chr9:34957964-34957744 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 148-366 |
| Cow position: | chr9:36490803-36490587 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 176, 96 |
| Conread position: | 148-366 |
| Cow position: | chr9:43871067-43871280 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 148-366 |
| Cow position: | chr9:49279563-49279759 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 148-366 |
| Cow position: | chr9:53608306-53608086 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 153 |
| Conread position: | 148-366 |
| Cow position: | chr9:61997511-61997288 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 149-252 |
| Cow position: | chr9:30124010-30124113 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-356 |
| Cow position: | chr9:9403086-9402887 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 170, 98 |
| Conread position: | 149-364 |
| Cow position: | chr9:50606859-50606647 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 171, 94 |
| Conread position: | 149-366 |
| Cow position: | chr9:28773211-28773425 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 98 |
| Conread position: | 150-348 |
| Cow position: | chr9:60037744-60037945 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 118, 107 |
| Conread position: | 150-361 |
| Cow position: | chr9:18073022-18072813 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 172, 12 |
| Conread position: | 150-366 |
| Cow position: | chr9:29006653-29006868 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 71 |
| Conread position: | 151-345 |
| Cow position: | chr9:8288709-8288904 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 169, 188 |
| Conread position: | 151-360 |
| Cow position: | chr9:40542210-40542414 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 54, 111 |
| Conread position: | 151-363 |
| Cow position: | chr9:27697637-27697424 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 151-366 |
| Cow position: | chr9:44467261-44467041 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 153-364 |
| Cow position: | chr9:5161971-5161765 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 154-366 |
| Cow position: | chr9:1350352-1350138 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 93, 76 |
| Conread position: | 157-364 |
| Cow position: | chr9:48343699-48343907 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 161-366 |
| Cow position: | chr9:14974829-14974618 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 162-366 |
| Cow position: | chr9:10092290-10092087 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 162-366 |
| Cow position: | chr9:33823201-33823399 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 178-333 |
| Cow position: | chr9:20465598-20465438 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 178-340 |
| Cow position: | chr9:58131609-58131442 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.