Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 294-527 |
| Cow position: | chr15:10569242-10569012 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 300-542 |
| Cow position: | chr15:20482984-20482735 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 304-490 |
| Cow position: | chr15:14323543-14323356 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 324-532 |
| Cow position: | chr15:15214903-15215119 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 325-525 |
| Cow position: | chr15:47821269-47821470 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 325-526 |
| Cow position: | chr15:23548100-23547897 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 326-530 |
| Cow position: | chr15:31599228-31599430 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 327-532 |
| Cow position: | chr15:49238099-49237894 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 328-492 |
| Cow position: | chr15:2117773-2117946 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 329-492 |
| Cow position: | chr15:23992742-23992913 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 332-509 |
| Cow position: | chr15:39916587-39916769 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 332-512 |
| Cow position: | chr15:31483263-31483452 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 332-518 |
| Cow position: | chr15:10189261-10189447 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 332-532 |
| Cow position: | chr15:20370828-20370625 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 332-538 |
| Cow position: | chr15:24411315-24411527 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 333-530 |
| Cow position: | chr15:30958314-30958115 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 113, 64 |
| Conread position: | 334-528 |
| Cow position: | chr15:8230665-8230468 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 98, 83 |
| Conread position: | 334-528 |
| Cow position: | chr15:17788008-17788204 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 334-530 |
| Cow position: | chr15:450153-449954 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 334-530 |
| Cow position: | chr15:11957443-11957639 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 335-518 |
| Cow position: | chr15:20282610-20282435 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 335-525 |
| Cow position: | chr15:24977274-24977083 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 335-527 |
| Cow position: | chr15:35967585-35967388 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 335-530 |
| Cow position: | chr15:6749946-6749749 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 335-542 |
| Cow position: | chr15:14758351-14758142 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 336-530 |
| Cow position: | chr15:8021955-8022150 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 336-530 |
| Cow position: | chr15:23109383-23109183 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 337-501 |
| Cow position: | chr15:20402643-20402474 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 339-529 |
| Cow position: | chr15:37918548-37918744 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 339-533 |
| Cow position: | chr15:3571685-3571882 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 340-527 |
| Cow position: | chr15:34255815-34255632 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 340-542 |
| Cow position: | chr15:1017845-1017634 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 341-542 |
| Cow position: | chr15:43611988-43612194 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 343-524 |
| Cow position: | chr15:52480040-52480222 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 343-525 |
| Cow position: | chr15:12170150-12170340 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 343-529 |
| Cow position: | chr15:24284891-24285078 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 343-537 |
| Cow position: | chr15:20777923-20778124 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 343-542 |
| Cow position: | chr15:19725803-19725608 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 344-542 |
| Cow position: | chr15:44252273-44252473 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 344-542 |
| Cow position: | chr15:50177016-50177222 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 345-518 |
| Cow position: | chr15:7980099-7980273 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 345-521 |
| Cow position: | chr15:34037278-34037099 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 345-542 |
| Cow position: | chr15:48486550-48486745 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 104, 60 |
| Conread position: | 353-518 |
| Cow position: | chr15:25688882-25689054 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 353-542 |
| Cow position: | chr15:9971062-9970866 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 353-542 |
| Cow position: | chr15:26934033-26933837 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 355-518 |
| Cow position: | chr15:24864345-24864182 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 357-530 |
| Cow position: | chr15:39894518-39894687 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 370-501 |
| Cow position: | chr15:28177392-28177525 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 372-508 |
| Cow position: | chr15:7059464-7059327 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 372-527 |
| Cow position: | chr15:7962022-7962175 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 372-530 |
| Cow position: | chr15:9494351-9494196 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 372-530 |
| Cow position: | chr15:10303162-10303322 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 372-530 |
| Cow position: | chr15:31545408-31545248 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 372-530 |
| Cow position: | chr15:31617066-31616906 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 372-542 |
| Cow position: | chr15:27863386-27863214 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 80, 33 |
| Conread position: | 374-528 |
| Cow position: | chr15:19280150-19279990 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 376-530 |
| Cow position: | chr15:26421655-26421501 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 42 |
| Conread position: | 376-542 |
| Cow position: | chr15:42195318-42195155 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 377-530 |
| Cow position: | chr15:9178257-9178106 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 386-537 |
| Cow position: | chr15:38322789-38322942 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 387-542 |
| Cow position: | chr15:40498338-40498181 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 392-526 |
| Cow position: | chr15:32011905-32011776 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 57, 21 |
Show alignments to all cow chromosomes.