Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 306-528 |
| Cow position: | chr16:18692933-18693159 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 310-527 |
| Cow position: | chr16:33121818-33121603 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 312-478 |
| Cow position: | chr16:55070305-55070480 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 313-448 |
| Cow position: | chr16:23065864-23065999 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 313-501 |
| Cow position: | chr16:15809187-15808996 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 320-540 |
| Cow position: | chr16:13660029-13660253 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 322-530 |
| Cow position: | chr16:5512007-5511796 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 325-524 |
| Cow position: | chr16:8025650-8025860 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 325-526 |
| Cow position: | chr16:30639527-30639330 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 325-530 |
| Cow position: | chr16:44898556-44898759 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 326-530 |
| Cow position: | chr16:44580877-44581083 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 326-542 |
| Cow position: | chr16:23025536-23025324 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 327-504 |
| Cow position: | chr16:42629247-42629428 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 332-512 |
| Cow position: | chr16:10611440-10611615 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 332-518 |
| Cow position: | chr16:50114385-50114187 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 332-525 |
| Cow position: | chr16:27261765-27261952 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 120, 72 |
| Conread position: | 333-527 |
| Cow position: | chr16:28454107-28454296 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 333-530 |
| Cow position: | chr16:44557-44360 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 334-537 |
| Cow position: | chr16:228305-228513 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 334-542 |
| Cow position: | chr16:22808363-22808584 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 334-542 |
| Cow position: | chr16:56445229-56445435 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 335-507 |
| Cow position: | chr16:4102630-4102819 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 336-501 |
| Cow position: | chr16:47116255-47116088 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 114, 70 |
| Conread position: | 336-524 |
| Cow position: | chr16:29655523-29655320 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 336-526 |
| Cow position: | chr16:52577648-52577451 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 338-488 |
| Cow position: | chr16:10406391-10406550 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 339-478 |
| Cow position: | chr16:11772062-11772208 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 340-515 |
| Cow position: | chr16:43762318-43762495 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 340-527 |
| Cow position: | chr16:14974363-14974548 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 64 |
| Conread position: | 340-530 |
| Cow position: | chr16:48493368-48493169 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 340-533 |
| Cow position: | chr16:16055875-16056073 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 343-527 |
| Cow position: | chr16:21462204-21462023 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 343-528 |
| Cow position: | chr16:11085198-11085390 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 343-530 |
| Cow position: | chr16:19977138-19976960 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 343-530 |
| Cow position: | chr16:27723408-27723213 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 343-540 |
| Cow position: | chr16:53267906-53267705 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 343-542 |
| Cow position: | chr16:8322794-8323005 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 344-542 |
| Cow position: | chr16:19002909-19003110 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 345-542 |
| Cow position: | chr16:37719335-37719135 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 105, 63 |
| Conread position: | 345-542 |
| Cow position: | chr16:42340377-42340173 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 345-542 |
| Cow position: | chr16:45693324-45693126 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 346-511 |
| Cow position: | chr16:56283125-56282955 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 351-541 |
| Cow position: | chr16:38621130-38620935 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 352-530 |
| Cow position: | chr16:689877-689693 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 353-516 |
| Cow position: | chr16:18557090-18557261 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 353-517 |
| Cow position: | chr16:3566335-3566171 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 355-530 |
| Cow position: | chr16:49321126-49320954 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 355-542 |
| Cow position: | chr16:26134202-26134391 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 360-530 |
| Cow position: | chr16:28266871-28267033 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 362-527 |
| Cow position: | chr16:10303591-10303753 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 372-518 |
| Cow position: | chr16:5580464-5580315 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 372-518 |
| Cow position: | chr16:27014050-27013897 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 372-521 |
| Cow position: | chr16:44693035-44693185 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 372-526 |
| Cow position: | chr16:23163426-23163582 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 372-533 |
| Cow position: | chr16:47909193-47909357 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 372-542 |
| Cow position: | chr16:15806101-15805932 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 372-542 |
| Cow position: | chr16:15938382-15938551 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 372-542 |
| Cow position: | chr16:23066804-23066640 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 372-542 |
| Cow position: | chr16:28827028-28827201 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 372-542 |
| Cow position: | chr16:36930169-36930338 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 373-516 |
| Cow position: | chr16:23978285-23978430 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 375-526 |
| Cow position: | chr16:44722889-44723036 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 387-527 |
| Cow position: | chr16:41711806-41711668 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 387-542 |
| Cow position: | chr16:9445094-9444939 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 397-527 |
| Cow position: | chr16:56104789-56104919 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 418-542 |
| Cow position: | chr16:4979908-4979779 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 436-537 |
| Cow position: | chr16:17606381-17606280 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.