Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 303-542 |
| Cow position: | chr17:32457310-32457548 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 324-524 |
| Cow position: | chr17:12342240-12342446 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 324-530 |
| Cow position: | chr17:20216412-20216197 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 325-504 |
| Cow position: | chr17:1525586-1525768 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 118, 91 |
| Conread position: | 325-527 |
| Cow position: | chr17:10769269-10769479 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 325-530 |
| Cow position: | chr17:9748981-9748776 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 325-530 |
| Cow position: | chr17:38139749-38139538 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 326-530 |
| Cow position: | chr17:15634646-15634852 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 326-533 |
| Cow position: | chr17:35387763-35387975 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 327-512 |
| Cow position: | chr17:43284885-43284693 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 328-521 |
| Cow position: | chr17:3619849-3620048 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 332-512 |
| Cow position: | chr17:20234449-20234258 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 332-523 |
| Cow position: | chr17:27819527-27819332 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 332-526 |
| Cow position: | chr17:12768578-12768773 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 118, 84 |
| Conread position: | 332-526 |
| Cow position: | chr17:30236423-30236231 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 332-542 |
| Cow position: | chr17:2271230-2271017 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 333-498 |
| Cow position: | chr17:8094074-8093908 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 66 |
| Conread position: | 333-521 |
| Cow position: | chr17:19239647-19239841 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 334-516 |
| Cow position: | chr17:10314652-10314464 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 334-516 |
| Cow position: | chr17:11655611-11655420 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 334-526 |
| Cow position: | chr17:7614145-7614346 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 334-542 |
| Cow position: | chr17:18568715-18568916 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 335-525 |
| Cow position: | chr17:36400327-36400136 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 115, 8 |
| Conread position: | 335-532 |
| Cow position: | chr17:36818267-36818067 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 335-542 |
| Cow position: | chr17:27505326-27505114 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 336-507 |
| Cow position: | chr17:33925787-33925966 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 88 |
| Conread position: | 337-527 |
| Cow position: | chr17:13715809-13716002 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 338-497 |
| Cow position: | chr17:9927587-9927420 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 339-491 |
| Cow position: | chr17:25338390-25338234 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 339-524 |
| Cow position: | chr17:14278290-14278097 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 339-530 |
| Cow position: | chr17:23803683-23803489 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 339-541 |
| Cow position: | chr17:26162199-26162403 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 339-542 |
| Cow position: | chr17:7205647-7205438 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 340-492 |
| Cow position: | chr17:37043198-37043349 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 340-507 |
| Cow position: | chr17:7163667-7163843 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 341-515 |
| Cow position: | chr17:8215413-8215236 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 341-526 |
| Cow position: | chr17:36216961-36217149 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 341-530 |
| Cow position: | chr17:13229602-13229408 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 341-540 |
| Cow position: | chr17:5360228-5360420 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 341-542 |
| Cow position: | chr17:36173741-36173955 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 178 |
| Conread position: | 343-522 |
| Cow position: | chr17:6996501-6996318 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 343-526 |
| Cow position: | chr17:143957-144142 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 343-530 |
| Cow position: | chr17:31798226-31798418 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 343-537 |
| Cow position: | chr17:728138-728331 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 112, 65 |
| Conread position: | 344-525 |
| Cow position: | chr17:10221069-10220885 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 345-526 |
| Cow position: | chr17:37778414-37778586 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 346-526 |
| Cow position: | chr17:39016317-39016132 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 349-530 |
| Cow position: | chr17:7595362-7595184 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 101, 67 |
| Conread position: | 351-533 |
| Cow position: | chr17:1328807-1328622 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 353-515 |
| Cow position: | chr17:8279502-8279663 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 353-542 |
| Cow position: | chr17:23147631-23147437 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 353-542 |
| Cow position: | chr17:37138966-37138780 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 360-526 |
| Cow position: | chr17:18887575-18887733 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 371-525 |
| Cow position: | chr17:3706448-3706601 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 372-526 |
| Cow position: | chr17:34870269-34870113 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 372-530 |
| Cow position: | chr17:33913385-33913546 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 373-542 |
| Cow position: | chr17:19891812-19891641 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 374-540 |
| Cow position: | chr17:24580108-24580275 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 376-525 |
| Cow position: | chr17:21373859-21373712 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 385-507 |
| Cow position: | chr17:8926041-8926165 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 385-530 |
| Cow position: | chr17:41891887-41892032 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 10 |
| Conread position: | 391-516 |
| Cow position: | chr17:13600810-13600937 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 59, 8 |
Show alignments to all cow chromosomes.