Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 314-530 |
| Cow position: | chr20:33178276-33178485 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 326-461 |
| Cow position: | chr20:32975438-32975302 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 327-475 |
| Cow position: | chr20:24868775-24868928 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 327-521 |
| Cow position: | chr20:32972786-32972591 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 327-542 |
| Cow position: | chr20:37029063-37028840 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 77 |
| Conread position: | 328-542 |
| Cow position: | chr20:23163667-23163880 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 329-490 |
| Cow position: | chr20:3105256-3105087 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 332-488 |
| Cow position: | chr20:29520998-29521156 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 332-501 |
| Cow position: | chr20:8444912-8445088 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 332-518 |
| Cow position: | chr20:24234381-24234202 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 332-527 |
| Cow position: | chr20:2456262-2456067 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 333-542 |
| Cow position: | chr20:17363423-17363636 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 88 |
| Conread position: | 333-542 |
| Cow position: | chr20:41109862-41110074 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 334-521 |
| Cow position: | chr20:15073600-15073795 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 159 |
| Conread position: | 334-530 |
| Cow position: | chr20:4157650-4157453 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 335-503 |
| Cow position: | chr20:6104918-6105095 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 88 |
| Conread position: | 336-530 |
| Cow position: | chr20:25823509-25823310 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 337-541 |
| Cow position: | chr20:39220493-39220696 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 338-515 |
| Cow position: | chr20:21518874-21518696 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 339-520 |
| Cow position: | chr20:21236877-21236699 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 108, 54 |
| Conread position: | 339-530 |
| Cow position: | chr20:1205707-1205897 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 340-530 |
| Cow position: | chr20:14679845-14679654 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 340-530 |
| Cow position: | chr20:20359555-20359751 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 341-524 |
| Cow position: | chr20:25274067-25274251 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 341-525 |
| Cow position: | chr20:24850029-24849843 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 343-516 |
| Cow position: | chr20:13465731-13465555 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 343-524 |
| Cow position: | chr20:37450772-37450587 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 343-527 |
| Cow position: | chr20:25686122-25686313 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 343-530 |
| Cow position: | chr20:7101011-7100814 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 343-532 |
| Cow position: | chr20:8262139-8261945 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 343-537 |
| Cow position: | chr20:4933845-4934044 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 29, 74 |
| Conread position: | 343-540 |
| Cow position: | chr20:4334294-4334509 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 343-542 |
| Cow position: | chr20:9706693-9706900 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 343-542 |
| Cow position: | chr20:10837990-10838192 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 344-518 |
| Cow position: | chr20:5763070-5763250 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 344-527 |
| Cow position: | chr20:17670403-17670218 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 345-541 |
| Cow position: | chr20:1576316-1576115 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 346-515 |
| Cow position: | chr20:6053252-6053422 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 346-518 |
| Cow position: | chr20:38858213-38858376 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 346-530 |
| Cow position: | chr20:25147000-25146814 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 106, 70 |
| Conread position: | 348-496 |
| Cow position: | chr20:14513248-14513097 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 353-460 |
| Cow position: | chr20:14920951-14920846 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 353-485 |
| Cow position: | chr20:6571824-6571691 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 55 |
| Conread position: | 353-504 |
| Cow position: | chr20:13617445-13617283 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 353-524 |
| Cow position: | chr20:6903528-6903351 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 354-528 |
| Cow position: | chr20:18530649-18530469 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 355-524 |
| Cow position: | chr20:16979962-16979786 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 356-516 |
| Cow position: | chr20:27001595-27001436 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 356-521 |
| Cow position: | chr20:10759264-10759432 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 372-504 |
| Cow position: | chr20:39418696-39418826 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 372-521 |
| Cow position: | chr20:15241572-15241724 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 374-527 |
| Cow position: | chr20:34108297-34108139 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 376-525 |
| Cow position: | chr20:14471385-14471535 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 431-542 |
| Cow position: | chr20:5576910-5576795 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.