Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 312-527 |
| Cow position: | chr24:28335371-28335595 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 314-512 |
| Cow position: | chr24:39765043-39764851 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 318-477 |
| Cow position: | chr24:6246202-6246372 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 323-537 |
| Cow position: | chr24:14337906-14337692 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 325-518 |
| Cow position: | chr24:22939866-22939669 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 327-500 |
| Cow position: | chr24:4785501-4785680 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 327-532 |
| Cow position: | chr24:39742986-39742779 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 328-530 |
| Cow position: | chr24:1438098-1438304 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 328-530 |
| Cow position: | chr24:25678192-25677996 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 331-508 |
| Cow position: | chr24:6677824-6677634 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 177 |
| Conread position: | 331-530 |
| Cow position: | chr24:40809195-40809397 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 332-525 |
| Cow position: | chr24:12136311-12136110 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 332-526 |
| Cow position: | chr24:23176531-23176729 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 333-530 |
| Cow position: | chr24:2970439-2970641 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 334-512 |
| Cow position: | chr24:41458280-41458104 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 334-518 |
| Cow position: | chr24:2143916-2143726 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 334-527 |
| Cow position: | chr24:31378917-31378724 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 334-542 |
| Cow position: | chr24:6507602-6507814 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 335-490 |
| Cow position: | chr24:44929515-44929353 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 335-517 |
| Cow position: | chr24:42916223-42916400 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 115, 8 |
| Conread position: | 335-537 |
| Cow position: | chr24:42942953-42943163 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 336-527 |
| Cow position: | chr24:19754743-19754544 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 336-542 |
| Cow position: | chr24:39350060-39350263 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 339-529 |
| Cow position: | chr24:7079945-7079752 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 339-542 |
| Cow position: | chr24:2964480-2964679 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 339-542 |
| Cow position: | chr24:27054569-27054363 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 111, 74 |
| Conread position: | 342-537 |
| Cow position: | chr24:23824272-23824464 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 343-478 |
| Cow position: | chr24:15909779-15909636 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 343-518 |
| Cow position: | chr24:38292013-38291837 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 343-524 |
| Cow position: | chr24:24755606-24755417 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 343-525 |
| Cow position: | chr24:6427861-6427674 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 343-537 |
| Cow position: | chr24:18786771-18786959 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 343-537 |
| Cow position: | chr24:28279781-28279582 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 343-541 |
| Cow position: | chr24:22888751-22888545 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 344-518 |
| Cow position: | chr24:16055354-16055535 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 344-526 |
| Cow position: | chr24:34368850-34369038 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 344-530 |
| Cow position: | chr24:32158118-32158308 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 349-527 |
| Cow position: | chr24:14617810-14617625 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 353-530 |
| Cow position: | chr24:28349731-28349540 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 131 |
| Conread position: | 356-527 |
| Cow position: | chr24:26455986-26455809 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 374-530 |
| Cow position: | chr24:25165157-25164998 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 375-542 |
| Cow position: | chr24:12452905-12452737 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 378-530 |
| Cow position: | chr24:35827855-35827702 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 380-542 |
| Cow position: | chr24:39474287-39474457 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 400-542 |
| Cow position: | chr24:27900824-27900683 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 409-542 |
| Cow position: | chr24:32085841-32085976 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.