Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 309-496 |
| Cow position: | chr25:20614934-20614745 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 312-524 |
| Cow position: | chr25:35109049-35109277 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 316-505 |
| Cow position: | chr25:31732107-31732310 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 316-515 |
| Cow position: | chr25:26089601-26089812 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 322-497 |
| Cow position: | chr25:27534498-27534666 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 325-487 |
| Cow position: | chr25:11041129-11040968 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 118, 26 |
| Conread position: | 325-513 |
| Cow position: | chr25:4716453-4716260 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 326-521 |
| Cow position: | chr25:24405536-24405738 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 326-542 |
| Cow position: | chr25:6178235-6178008 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 327-530 |
| Cow position: | chr25:27534722-27534932 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 328-530 |
| Cow position: | chr25:33204889-33205092 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 328-542 |
| Cow position: | chr25:14570562-14570349 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 121, 88 |
| Conread position: | 329-525 |
| Cow position: | chr25:33111789-33111976 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 329-530 |
| Cow position: | chr25:26240735-26240525 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 329-542 |
| Cow position: | chr25:22575333-22575550 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 332-521 |
| Cow position: | chr25:8511902-8512092 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 333-527 |
| Cow position: | chr25:12932816-12932615 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 339-521 |
| Cow position: | chr25:15025092-15024907 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 339-530 |
| Cow position: | chr25:24136260-24136448 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 339-541 |
| Cow position: | chr25:19524260-19524454 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 339-542 |
| Cow position: | chr25:14075487-14075279 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 341-518 |
| Cow position: | chr25:5365715-5365527 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 341-526 |
| Cow position: | chr25:40339064-40338881 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 65 |
| Conread position: | 343-530 |
| Cow position: | chr25:26457497-26457691 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 343-532 |
| Cow position: | chr25:34970636-34970448 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 343-537 |
| Cow position: | chr25:41093957-41094156 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 344-521 |
| Cow position: | chr25:18448990-18448808 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 344-523 |
| Cow position: | chr25:18000352-18000536 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 344-540 |
| Cow position: | chr25:18266341-18266139 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 345-468 |
| Cow position: | chr25:18811037-18810913 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 345-529 |
| Cow position: | chr25:36501062-36501254 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 347-527 |
| Cow position: | chr25:8576869-8576683 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 348-541 |
| Cow position: | chr25:20624762-20624956 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 348-542 |
| Cow position: | chr25:10748332-10748526 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 351-490 |
| Cow position: | chr25:18228348-18228204 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 351-517 |
| Cow position: | chr25:23248569-23248741 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 353-491 |
| Cow position: | chr25:37469904-37469766 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 353-521 |
| Cow position: | chr25:13321348-13321177 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 63 |
| Conread position: | 353-527 |
| Cow position: | chr25:23410829-23410657 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 353-532 |
| Cow position: | chr25:17701822-17702010 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 353-542 |
| Cow position: | chr25:20076668-20076471 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 357-515 |
| Cow position: | chr25:27504038-27504196 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 357-542 |
| Cow position: | chr25:13560048-13560237 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 367-523 |
| Cow position: | chr25:18161434-18161281 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 367-530 |
| Cow position: | chr25:20428469-20428306 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 372-502 |
| Cow position: | chr25:20884942-20885072 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 372-527 |
| Cow position: | chr25:29312191-29312345 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 372-530 |
| Cow position: | chr25:10011913-10012072 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 372-537 |
| Cow position: | chr25:40956841-40957005 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 374-527 |
| Cow position: | chr25:13562576-13562427 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 374-542 |
| Cow position: | chr25:8080870-8080700 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 375-542 |
| Cow position: | chr25:34378962-34379131 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 380-521 |
| Cow position: | chr25:20811235-20811378 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 24 |
Show alignments to all cow chromosomes.