Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 291-530 |
| Cow position: | chr28:12999334-12999091 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 43 |
| Conread position: | 304-542 |
| Cow position: | chr28:15678117-15677867 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 121 |
| Conread position: | 325-504 |
| Cow position: | chr28:6578276-6578090 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 325-541 |
| Cow position: | chr28:7539952-7540175 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 325-542 |
| Cow position: | chr28:1202040-1202259 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 326-495 |
| Cow position: | chr28:34749939-34749763 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 327-527 |
| Cow position: | chr28:6643077-6643286 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 332-493 |
| Cow position: | chr28:22331249-22331088 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 332-542 |
| Cow position: | chr28:8789351-8789139 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 333-530 |
| Cow position: | chr28:5980113-5979916 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 334-511 |
| Cow position: | chr28:15406250-15406073 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 74 |
| Conread position: | 334-537 |
| Cow position: | chr28:4764073-4763866 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 334-537 |
| Cow position: | chr28:21570371-21570177 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 335-530 |
| Cow position: | chr28:9294297-9294500 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 335-541 |
| Cow position: | chr28:19253673-19253465 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 336-526 |
| Cow position: | chr28:31165788-31165985 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 336-528 |
| Cow position: | chr28:24500401-24500200 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 336-532 |
| Cow position: | chr28:14508172-14508380 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 337-527 |
| Cow position: | chr28:14495015-14494821 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 337-530 |
| Cow position: | chr28:17362406-17362606 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 337-542 |
| Cow position: | chr28:23007530-23007749 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 339-491 |
| Cow position: | chr28:17624980-17625140 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 339-526 |
| Cow position: | chr28:1608381-1608185 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 341-541 |
| Cow position: | chr28:4274655-4274857 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 343-488 |
| Cow position: | chr28:24700960-24700808 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 343-518 |
| Cow position: | chr28:23668598-23668777 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 107, 74 |
| Conread position: | 343-521 |
| Cow position: | chr28:11007387-11007201 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 343-525 |
| Cow position: | chr28:3822954-3823136 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 343-525 |
| Cow position: | chr28:15081739-15081921 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 107, 65 |
| Conread position: | 343-527 |
| Cow position: | chr28:11500705-11500891 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 343-530 |
| Cow position: | chr28:5406729-5406553 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 343-530 |
| Cow position: | chr28:25825678-25825869 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 344-508 |
| Cow position: | chr28:15591459-15591294 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 98, 40 |
| Conread position: | 344-530 |
| Cow position: | chr28:18934640-18934447 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 344-541 |
| Cow position: | chr28:26372926-26372724 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 166 |
| Conread position: | 344-542 |
| Cow position: | chr28:26719535-26719324 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 346-524 |
| Cow position: | chr28:34198925-34199107 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 346-527 |
| Cow position: | chr28:7157015-7156833 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 347-502 |
| Cow position: | chr28:22421809-22421964 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 29 |
| Conread position: | 350-526 |
| Cow position: | chr28:8336136-8335959 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 353-537 |
| Cow position: | chr28:11180988-11181176 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 356-542 |
| Cow position: | chr28:20963354-20963548 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 360-518 |
| Cow position: | chr28:7805256-7805417 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 367-542 |
| Cow position: | chr28:9237472-9237295 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 370-529 |
| Cow position: | chr28:20275285-20275125 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 6, 47 |
| Conread position: | 372-496 |
| Cow position: | chr28:28641009-28640889 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 372-526 |
| Cow position: | chr28:5474879-5475030 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 372-537 |
| Cow position: | chr28:3769517-3769678 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 372-541 |
| Cow position: | chr28:25340423-25340255 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 373-533 |
| Cow position: | chr28:9176607-9176760 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 376-527 |
| Cow position: | chr28:13865991-13865842 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 388-540 |
| Cow position: | chr28:21873897-21873743 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 29 |
Show alignments to all cow chromosomes.