Cow genome map
| Conread name: | Pig2-40K14 |
| Conread position: | 297-522 |
| Cow position: | chr29:27613573-27613798 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 323-526 |
| Cow position: | chr29:708931-709143 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 325-521 |
| Cow position: | chr29:13126927-13127127 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 326-515 |
| Cow position: | chr29:19607327-19607523 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 95 |
| Conread position: | 331-509 |
| Cow position: | chr29:11071493-11071680 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 332-516 |
| Cow position: | chr29:21265952-21265761 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 85 |
| Conread position: | 332-521 |
| Cow position: | chr29:4444909-4444713 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 332-524 |
| Cow position: | chr29:35442269-35442470 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 332-526 |
| Cow position: | chr29:29302471-29302668 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 332-542 |
| Cow position: | chr29:8862288-8862505 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 333-524 |
| Cow position: | chr29:12625788-12625984 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 333-530 |
| Cow position: | chr29:11366424-11366225 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 333-530 |
| Cow position: | chr29:30350742-30350945 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 334-482 |
| Cow position: | chr29:19680-19525 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 334-537 |
| Cow position: | chr29:7663082-7663289 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 334-542 |
| Cow position: | chr29:4367912-4367701 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 334-542 |
| Cow position: | chr29:9912362-9912150 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 98 |
| Conread position: | 335-528 |
| Cow position: | chr29:15940449-15940642 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 335-542 |
| Cow position: | chr29:41083330-41083123 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 336-524 |
| Cow position: | chr29:29559539-29559727 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 336-528 |
| Cow position: | chr29:11766903-11766710 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 337-512 |
| Cow position: | chr29:22721559-22721381 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 338-527 |
| Cow position: | chr29:21186688-21186882 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 339-511 |
| Cow position: | chr29:18021497-18021678 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 339-512 |
| Cow position: | chr29:6208245-6208069 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 339-517 |
| Cow position: | chr29:5616683-5616869 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 339-542 |
| Cow position: | chr29:1340967-1340760 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 342-542 |
| Cow position: | chr29:18963916-18963709 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 343-512 |
| Cow position: | chr29:21012165-21012338 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 343-530 |
| Cow position: | chr29:10153612-10153809 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 155 |
| Conread position: | 343-530 |
| Cow position: | chr29:18073118-18072931 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 343-530 |
| Cow position: | chr29:18695424-18695239 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 343-530 |
| Cow position: | chr29:40337363-40337551 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 343-542 |
| Cow position: | chr29:942801-942606 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 343-542 |
| Cow position: | chr29:11005911-11005709 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 344-488 |
| Cow position: | chr29:8794533-8794379 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 344-526 |
| Cow position: | chr29:26299150-26298965 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 345-527 |
| Cow position: | chr29:5976612-5976794 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 345-530 |
| Cow position: | chr29:37960799-37960988 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 346-498 |
| Cow position: | chr29:15042622-15042468 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 347-542 |
| Cow position: | chr29:7054587-7054394 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 348-518 |
| Cow position: | chr29:21675566-21675394 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 350-537 |
| Cow position: | chr29:22895901-22895706 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 351-521 |
| Cow position: | chr29:27688570-27688743 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 353-497 |
| Cow position: | chr29:942994-942839 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 353-542 |
| Cow position: | chr29:9512426-9512232 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 93, 63 |
| Conread position: | 354-499 |
| Cow position: | chr29:2274675-2274822 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 354-530 |
| Cow position: | chr29:26129659-26129485 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 364-525 |
| Cow position: | chr29:14758706-14758867 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 372-527 |
| Cow position: | chr29:39023191-39023350 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 372-537 |
| Cow position: | chr29:26985374-26985206 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 372-542 |
| Cow position: | chr29:6772276-6772110 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 372-542 |
| Cow position: | chr29:25426512-25426680 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 384-530 |
| Cow position: | chr29:9937947-9938093 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 386-521 |
| Cow position: | chr29:25923829-25923965 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 409-529 |
| Cow position: | chr29:36435542-36435416 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 107 |
Show alignments to all cow chromosomes.