Cow genome map

Conread name: Pig2-40K14

Conread position: 312-529
Cow position: chr3:57829894-57830122 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 106

Conread position: 314-526
Cow position: chr3:26493053-26493262 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 136, 9

Conread position: 314-527
Cow position: chr3:3036736-3036958 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 35

Conread position: 316-521
Cow position: chr3:37187013-37186800 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 106

Conread position: 325-506
Cow position: chr3:48211681-48211499 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 83

Conread position: 325-530
Cow position: chr3:42480792-42480583 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 103

Conread position: 325-530
Cow position: chr3:64172616-64172404 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 18

Conread position: 325-542
Cow position: chr3:41718567-41718349 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 95

Conread position: 326-527
Cow position: chr3:2199059-2198850 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 97

Conread position: 326-527
Cow position: chr3:64536395-64536592 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 17

Conread position: 326-542
Cow position: chr3:68262929-68262718 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 126, 42

Conread position: 328-530
Cow position: chr3:15654977-15655182 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 80

Conread position: 328-537
Cow position: chr3:63146983-63147194 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 106, 80

Conread position: 330-501
Cow position: chr3:8746063-8746238 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 79

Conread position: 331-525
Cow position: chr3:5419698-5419890 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 85

Conread position: 331-530
Cow position: chr3:15221348-15221553 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 32

Conread position: 331-537
Cow position: chr3:18216604-18216810 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 89

Conread position: 332-526
Cow position: chr3:50281583-50281783 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 80

Conread position: 332-527
Cow position: chr3:18725475-18725676 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 88

Conread position: 332-530
Cow position: chr3:24353027-24352825 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 19

Conread position: 332-533
Cow position: chr3:74611735-74611529 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 92

Conread position: 332-536
Cow position: chr3:62291962-62292161 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 41

Conread position: 332-542
Cow position: chr3:9074174-9074393 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 91

Conread position: 333-527
Cow position: chr3:25075999-25076199 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 10

Conread position: 333-537
Cow position: chr3:17633880-17634085 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 18

Conread position: 334-498
Cow position: chr3:26740871-26741035 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 10, 45

Conread position: 334-525
Cow position: chr3:58131158-58130965 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 87

Conread position: 334-542
Cow position: chr3:51492951-51492737 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 87

Conread position: 335-542
Cow position: chr3:48629427-48629637 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 114, 71

Conread position: 336-530
Cow position: chr3:53588223-53588419 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 40, 32

Conread position: 336-530
Cow position: chr3:61116692-61116889 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 32, 22

Conread position: 336-531
Cow position: chr3:65771171-65771368 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 76

Conread position: 336-537
Cow position: chr3:37485636-37485839 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 114, 72

Conread position: 337-496
Cow position: chr3:68085949-68086111 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 85

Conread position: 337-508
Cow position: chr3:31247825-31247654 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 43

Conread position: 338-526
Cow position: chr3:51780831-51781022 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 96

Conread position: 338-527
Cow position: chr3:58447904-58448092 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 77

Conread position: 339-515
Cow position: chr3:36204708-36204532 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 32

Conread position: 339-518
Cow position: chr3:27246786-27246983 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 339-521
Cow position: chr3:40100548-40100744 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 339-525
Cow position: chr3:26088834-26089032 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 82

Conread position: 339-536
Cow position: chr3:57846770-57846973 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 29

Conread position: 339-542
Cow position: chr3:41550213-41550422 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 82

Conread position: 340-491
Cow position: chr3:62798627-62798781 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 65

Conread position: 340-518
Cow position: chr3:68342098-68342272 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 72

Conread position: 340-518
Cow position: chr3:70354077-70354256 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 73

Conread position: 340-527
Cow position: chr3:27532500-27532686 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 110, 42

Conread position: 340-530
Cow position: chr3:891424-891233 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 79

Conread position: 340-534
Cow position: chr3:75142427-75142615 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 340-541
Cow position: chr3:60389933-60389717 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 340-542
Cow position: chr3:58764906-58765125 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 341-461
Cow position: chr3:44838414-44838292 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 68

Conread position: 342-525
Cow position: chr3:73741709-73741899 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 72

Conread position: 343-517
Cow position: chr3:73436282-73436463 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 70

Conread position: 343-529
Cow position: chr3:23111356-23111547 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 66

Conread position: 343-530
Cow position: chr3:30839400-30839214 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 50

Conread position: 343-530
Cow position: chr3:61411279-61411092 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 78

Conread position: 343-537
Cow position: chr3:1004793-1004602 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 70

Conread position: 343-537
Cow position: chr3:77225270-77225076 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 79

Conread position: 343-540
Cow position: chr3:12255630-12255435 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 110, 39

Conread position: 343-540
Cow position: chr3:50614800-50614595 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 78

Conread position: 343-542
Cow position: chr3:8752943-8752740 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 33, 76

Conread position: 343-542
Cow position: chr3:23091820-23092023 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 78

Conread position: 343-542
Cow position: chr3:54340264-54340469 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 74

Conread position: 343-542
Cow position: chr3:59608655-59608455 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 40

Conread position: 344-530
Cow position: chr3:22953728-22953914 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 76

Conread position: 344-537
Cow position: chr3:42584695-42584500 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 64

Conread position: 344-542
Cow position: chr3:28238429-28238620 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 7

Conread position: 344-542
Cow position: chr3:49131904-49132111 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 78

Conread position: 346-526
Cow position: chr3:20471212-20471396 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 26, 10

Conread position: 346-537
Cow position: chr3:36100985-36100796 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 156
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 103, 71

Conread position: 346-538
Cow position: chr3:55991714-55991908 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 70

Conread position: 349-521
Cow position: chr3:74846554-74846736 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 74

Conread position: 353-542
Cow position: chr3:5601020-5601214 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 62

Conread position: 353-542
Cow position: chr3:56483668-56483468 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 68

Conread position: 354-519
Cow position: chr3:8457796-8457630 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 96, 22

Conread position: 356-542
Cow position: chr3:3736445-3736251 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 65

Conread position: 361-517
Cow position: chr3:34085918-34086077 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 57

Conread position: 361-542
Cow position: chr3:53091619-53091443 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 41

Conread position: 364-515
Cow position: chr3:46094955-46094803 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 45

Conread position: 364-541
Cow position: chr3:29507713-29507535 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 8

Conread position: 367-526
Cow position: chr3:14505785-14505946 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 49

Conread position: 372-515
Cow position: chr3:35278695-35278555 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 36

Conread position: 372-521
Cow position: chr3:24300485-24300334 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 44

Conread position: 372-542
Cow position: chr3:18458542-18458706 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 372-542
Cow position: chr3:66707945-66708114 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 25

Conread position: 373-542
Cow position: chr3:34675846-34675675 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 44

Conread position: 374-521
Cow position: chr3:20993936-20993786 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 42

Conread position: 375-530
Cow position: chr3:35873852-35874002 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 380-537
Cow position: chr3:33327826-33327666 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 36

Show alignments to all cow chromosomes.