Cow genome map

Conread name: Pig2-40K14

Conread position: 304-542
Cow position: chr4:17378632-17378868 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 117

Conread position: 310-532
Cow position: chr4:58834192-58834425 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 33

Conread position: 315-532
Cow position: chr4:9800204-9799984 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 28

Conread position: 318-537
Cow position: chr4:37035037-37035261 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 21

Conread position: 323-537
Cow position: chr4:20279519-20279302 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 85

Conread position: 324-530
Cow position: chr4:62412046-62411834 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 86

Conread position: 324-537
Cow position: chr4:5002950-5002739 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 48

Conread position: 325-512
Cow position: chr4:21063600-21063791 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 34

Conread position: 325-523
Cow position: chr4:6208648-6208449 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 83

Conread position: 325-527
Cow position: chr4:63471884-63472091 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 33

Conread position: 325-530
Cow position: chr4:51605428-51605632 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 36

Conread position: 325-541
Cow position: chr4:34369254-34369480 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 36

Conread position: 326-504
Cow position: chr4:12561231-12561047 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 85

Conread position: 326-541
Cow position: chr4:24433170-24432950 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 52, 17

Conread position: 327-525
Cow position: chr4:8083599-8083813 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 330-469
Cow position: chr4:63954963-63955104 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 9

Conread position: 330-524
Cow position: chr4:35870391-35870192 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 85

Conread position: 331-504
Cow position: chr4:43813694-43813867 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 17

Conread position: 331-527
Cow position: chr4:24415740-24415550 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 45

Conread position: 331-531
Cow position: chr4:51123251-51123041 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 87

Conread position: 331-537
Cow position: chr4:1374539-1374337 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 25

Conread position: 332-537
Cow position: chr4:20066040-20066244 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 75

Conread position: 332-542
Cow position: chr4:44279749-44279967 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 90

Conread position: 333-516
Cow position: chr4:2169253-2169063 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 88

Conread position: 333-527
Cow position: chr4:23495093-23494905 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 117, 75

Conread position: 333-542
Cow position: chr4:29291709-29291485 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 183

Conread position: 335-526
Cow position: chr4:5580740-5580543 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 26

Conread position: 335-533
Cow position: chr4:2610404-2610208 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 79

Conread position: 336-542
Cow position: chr4:54146294-54146493 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 36

Conread position: 337-526
Cow position: chr4:23758984-23758793 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 73

Conread position: 338-496
Cow position: chr4:34762156-34762319 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 62

Conread position: 339-515
Cow position: chr4:10836355-10836172 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 24

Conread position: 339-515
Cow position: chr4:39617140-39616968 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 78

Conread position: 339-527
Cow position: chr4:26373501-26373689 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 58

Conread position: 339-528
Cow position: chr4:53617001-53616812 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 77

Conread position: 339-542
Cow position: chr4:2121218-2121428 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 71

Conread position: 339-542
Cow position: chr4:23167077-23166877 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 18, 70

Conread position: 340-525
Cow position: chr4:961469-961664 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 188

Conread position: 340-530
Cow position: chr4:10992023-10992216 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 81

Conread position: 340-530
Cow position: chr4:22235504-22235310 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 61

Conread position: 340-542
Cow position: chr4:22449344-22449552 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 81

Conread position: 340-542
Cow position: chr4:39767527-39767323 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 81

Conread position: 340-542
Cow position: chr4:56570982-56570775 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 18

Conread position: 343-502
Cow position: chr4:45115604-45115770 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 70

Conread position: 343-521
Cow position: chr4:38699982-38700167 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 69

Conread position: 343-526
Cow position: chr4:29709585-29709781 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 343-532
Cow position: chr4:22249275-22249465 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 66

Conread position: 343-537
Cow position: chr4:25973073-25972874 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 68

Conread position: 344-508
Cow position: chr4:18956491-18956655 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 52

Conread position: 344-521
Cow position: chr4:5913171-5913356 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 70

Conread position: 344-528
Cow position: chr4:31348008-31348203 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 344-542
Cow position: chr4:21249854-21250063 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 21

Conread position: 344-542
Cow position: chr4:36945020-36945224 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 77

Conread position: 344-542
Cow position: chr4:45871692-45871897 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 76

Conread position: 344-542
Cow position: chr4:50769593-50769798 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 33, 64

Conread position: 345-517
Cow position: chr4:51433583-51433404 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 76

Conread position: 345-526
Cow position: chr4:2596699-2596889 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 67

Conread position: 347-521
Cow position: chr4:60031074-60030896 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 64

Conread position: 347-532
Cow position: chr4:21365573-21365388 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 74

Conread position: 349-499
Cow position: chr4:19334713-19334869 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 349-527
Cow position: chr4:5798133-5797951 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 70

Conread position: 351-542
Cow position: chr4:12697796-12697609 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 46

Conread position: 352-521
Cow position: chr4:52226169-52225995 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 61

Conread position: 353-521
Cow position: chr4:44665207-44665382 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 68

Conread position: 353-527
Cow position: chr4:40433741-40433918 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 65

Conread position: 353-540
Cow position: chr4:58707010-58707208 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 353-542
Cow position: chr4:45234707-45234904 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 24, 68

Conread position: 353-542
Cow position: chr4:52088091-52087897 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 29

Conread position: 354-515
Cow position: chr4:65167705-65167869 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 56

Conread position: 355-521
Cow position: chr4:47446070-47445918 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 355-542
Cow position: chr4:36813539-36813347 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 64

Conread position: 356-526
Cow position: chr4:37881093-37880920 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 43

Conread position: 356-542
Cow position: chr4:40822950-40823144 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 65

Conread position: 361-542
Cow position: chr4:9199116-9198937 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 89, 59

Conread position: 364-530
Cow position: chr4:53752670-53752507 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 36

Conread position: 365-542
Cow position: chr4:14550982-14550810 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 51

Conread position: 372-512
Cow position: chr4:21862729-21862871 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 42

Conread position: 372-521
Cow position: chr4:27997829-27997677 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 44

Conread position: 372-525
Cow position: chr4:21073014-21073166 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 44

Conread position: 372-527
Cow position: chr4:17304252-17304409 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 47

Conread position: 373-530
Cow position: chr4:68795157-68795311 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 22

Conread position: 384-530
Cow position: chr4:45952259-45952398 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 32

Show alignments to all cow chromosomes.