Cow genome map

Conread name: Pig2-40K14

Conread position: 302-501
Cow position: chr5:18695402-18695203 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 148, 7

Conread position: 312-515
Cow position: chr5:71454368-71454583 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 113

Conread position: 313-524
Cow position: chr5:18276716-18276502 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 108

Conread position: 315-493
Cow position: chr5:27293434-27293618 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 17

Conread position: 316-518
Cow position: chr5:47836789-47836574 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 98

Conread position: 323-540
Cow position: chr5:23640790-23641006 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 86

Conread position: 324-518
Cow position: chr5:3059145-3058950 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 95

Conread position: 324-527
Cow position: chr5:51503223-51503025 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 47

Conread position: 325-518
Cow position: chr5:50860091-50859892 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 74

Conread position: 325-518
Cow position: chr5:56385442-56385241 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 90

Conread position: 325-537
Cow position: chr5:41598485-41598704 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 96

Conread position: 326-530
Cow position: chr5:41604852-41604642 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 98

Conread position: 327-512
Cow position: chr5:33342649-33342832 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 51

Conread position: 327-524
Cow position: chr5:25899650-25899851 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 74

Conread position: 331-501
Cow position: chr5:37272610-37272438 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 77

Conread position: 331-524
Cow position: chr5:23527408-23527611 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 88

Conread position: 332-487
Cow position: chr5:39134040-39134203 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 81

Conread position: 332-512
Cow position: chr5:33340926-33341104 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 46

Conread position: 332-530
Cow position: chr5:34914336-34914538 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 22, 85

Conread position: 332-542
Cow position: chr5:23366549-23366761 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 85

Conread position: 333-525
Cow position: chr5:66190203-66190007 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 88

Conread position: 333-527
Cow position: chr5:58320254-58320451 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 17

Conread position: 333-542
Cow position: chr5:1349573-1349789 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 91

Conread position: 334-511
Cow position: chr5:27503147-27502969 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 55

Conread position: 334-518
Cow position: chr5:21530892-21531079 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 116, 74

Conread position: 334-527
Cow position: chr5:31660442-31660640 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 65

Conread position: 335-521
Cow position: chr5:15483252-15483055 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 89

Conread position: 335-526
Cow position: chr5:41637079-41636890 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 84

Conread position: 335-530
Cow position: chr5:3442660-3442464 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 85

Conread position: 335-530
Cow position: chr5:28945843-28946045 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 30

Conread position: 335-537
Cow position: chr5:39695866-39695659 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 17

Conread position: 336-528
Cow position: chr5:28035959-28035760 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 102

Conread position: 338-530
Cow position: chr5:29844494-29844294 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 83

Conread position: 338-542
Cow position: chr5:17028309-17028097 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 40, 83

Conread position: 339-506
Cow position: chr5:25681148-25681317 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 82

Conread position: 339-527
Cow position: chr5:36027937-36028126 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 58

Conread position: 339-537
Cow position: chr5:75687118-75687322 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 22

Conread position: 339-538
Cow position: chr5:58344072-58343865 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 80

Conread position: 340-529
Cow position: chr5:54090244-54090051 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 109, 0

Conread position: 340-536
Cow position: chr5:29756548-29756346 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 73

Conread position: 340-541
Cow position: chr5:36487483-36487691 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 81

Conread position: 340-542
Cow position: chr5:27102582-27102792 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 83

Conread position: 343-490
Cow position: chr5:33697345-33697494 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 61

Conread position: 343-492
Cow position: chr5:5929668-5929511 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 70

Conread position: 343-506
Cow position: chr5:42049888-42049723 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 66

Conread position: 343-518
Cow position: chr5:3649255-3649431 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 66

Conread position: 343-522
Cow position: chr5:70387999-70387804 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 343-526
Cow position: chr5:59303083-59303260 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 39

Conread position: 343-527
Cow position: chr5:27411197-27411384 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 107, 74

Conread position: 343-530
Cow position: chr5:6987654-6987464 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 83, 52

Conread position: 343-530
Cow position: chr5:42782520-42782710 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 73

Conread position: 343-533
Cow position: chr5:27419520-27419716 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 78

Conread position: 343-533
Cow position: chr5:34279404-34279591 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 107, 43

Conread position: 343-538
Cow position: chr5:45396204-45396403 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 68

Conread position: 343-542
Cow position: chr5:49946114-49945915 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 54

Conread position: 343-542
Cow position: chr5:58748976-58748773 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 57

Conread position: 344-520
Cow position: chr5:34441573-34441756 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 76

Conread position: 344-542
Cow position: chr5:47680809-47681015 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 79

Conread position: 345-496
Cow position: chr5:36825522-36825369 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 64

Conread position: 345-512
Cow position: chr5:23529076-23529248 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 76

Conread position: 345-530
Cow position: chr5:39442503-39442312 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 63

Conread position: 353-494
Cow position: chr5:51048813-51048670 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 96, 55

Conread position: 353-522
Cow position: chr5:48178183-48178364 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 66

Conread position: 353-531
Cow position: chr5:23536374-23536185 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 55

Conread position: 353-542
Cow position: chr5:63328701-63328889 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 42

Conread position: 354-527
Cow position: chr5:18554084-18553914 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 354-542
Cow position: chr5:46798440-46798246 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 67

Conread position: 355-542
Cow position: chr5:15837698-15837887 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 66

Conread position: 357-515
Cow position: chr5:17267699-17267862 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 62

Conread position: 357-525
Cow position: chr5:56799078-56799247 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 53

Conread position: 371-518
Cow position: chr5:7432983-7433133 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 66, 47

Conread position: 372-512
Cow position: chr5:1949883-1950022 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 74, 44

Conread position: 372-516
Cow position: chr5:21356716-21356857 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 21

Conread position: 372-516
Cow position: chr5:62639079-62638932 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 45

Conread position: 372-521
Cow position: chr5:61365711-61365555 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 49

Conread position: 372-526
Cow position: chr5:42316740-42316890 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 372-527
Cow position: chr5:30333125-30332972 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 44

Conread position: 372-540
Cow position: chr5:26594924-26595099 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 46

Conread position: 372-542
Cow position: chr5:41946022-41945853 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 80, 41

Conread position: 373-530
Cow position: chr5:72363846-72364002 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 137, 46

Conread position: 374-535
Cow position: chr5:48535965-48535808 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 56

Conread position: 374-541
Cow position: chr5:39875297-39875127 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 79, 42

Conread position: 376-527
Cow position: chr5:27008063-27007917 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 17

Conread position: 376-530
Cow position: chr5:49655857-49656006 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 29

Conread position: 393-521
Cow position: chr5:53145598-53145729 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 24

Conread position: 421-541
Cow position: chr5:21534983-21535109 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.