Cow genome map
| Conread name: | Pig2-40K14 | 
| Conread position: | 298-542 | 
| Cow position: | chr6:41655768-41656026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 11, 33 | 
| Conread position: | 301-542 | 
| Cow position: | chr6:46676171-46676411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 34, 58 | 
| Conread position: | 312-512 | 
| Cow position: | chr6:47026730-47026523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 17, 28 | 
| Conread position: | 312-527 | 
| Cow position: | chr6:36194846-36194630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 64, 103 | 
| Conread position: | 315-504 | 
| Cow position: | chr6:62379950-62379759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 25, 102 | 
| Conread position: | 320-530 | 
| Cow position: | chr6:15782273-15782486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 32, 98 | 
| Conread position: | 322-519 | 
| Cow position: | chr6:4740938-4740749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 119, 70 | 
| Conread position: | 322-542 | 
| Cow position: | chr6:24545860-24545630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 14, 102 | 
| Conread position: | 324-518 | 
| Cow position: | chr6:40409-40610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 26, 100 | 
| Conread position: | 324-525 | 
| Cow position: | chr6:12652444-12652242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 15, 94 | 
| Conread position: | 324-527 | 
| Cow position: | chr6:13719009-13718795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 13, 91 | 
| Conread position: | 325-537 | 
| Cow position: | chr6:6943446-6943658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 125, 93 | 
| Conread position: | 325-537 | 
| Cow position: | chr6:15943760-15943979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 57, 95 | 
| Conread position: | 325-540 | 
| Cow position: | chr6:17534277-17534495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 11, 99 | 
| Conread position: | 326-526 | 
| Cow position: | chr6:50034493-50034694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 14, 93 | 
| Conread position: | 326-527 | 
| Cow position: | chr6:59496452-59496251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 52, 33 | 
| Conread position: | 326-529 | 
| Cow position: | chr6:30701680-30701475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 51, 23 | 
| Conread position: | 326-530 | 
| Cow position: | chr6:38914680-38914471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 52, 95 | 
| Conread position: | 326-530 | 
| Cow position: | chr6:54478910-54479122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 10, 93 | 
| Conread position: | 326-532 | 
| Cow position: | chr6:4023336-4023128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 124, 82 | 
| Conread position: | 327-506 | 
| Cow position: | chr6:25224474-25224291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 41, 82 | 
| Conread position: | 329-521 | 
| Cow position: | chr6:34549631-34549439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 48, 61 | 
| Conread position: | 331-490 | 
| Cow position: | chr6:31225942-31225775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 41, 82 | 
| Conread position: | 331-542 | 
| Cow position: | chr6:55475493-55475272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 18, 93 | 
| Conread position: | 332-494 | 
| Cow position: | chr6:22863034-22863196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 37, 87 | 
| Conread position: | 332-516 | 
| Cow position: | chr6:7707365-7707176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 46, 18 | 
| Conread position: | 332-526 | 
| Cow position: | chr6:28079683-28079882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 15, 76 | 
| Conread position: | 332-526 | 
| Cow position: | chr6:57118713-57118909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 46, 74 | 
| Conread position: | 332-527 | 
| Cow position: | chr6:15996987-15997182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 48, 77 | 
| Conread position: | 332-541 | 
| Cow position: | chr6:16626179-16625960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 118, 76 | 
| Conread position: | 332-542 | 
| Cow position: | chr6:28083779-28083998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 46, 165 | 
| Conread position: | 333-518 | 
| Cow position: | chr6:37612338-37612147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 39, 80 | 
| Conread position: | 333-521 | 
| Cow position: | chr6:33929322-33929510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 28, 16 | 
| Conread position: | 333-529 | 
| Cow position: | chr6:48572652-48572851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 43, 10 | 
| Conread position: | 334-526 | 
| Cow position: | chr6:6596798-6596608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 20, 84 | 
| Conread position: | 334-542 | 
| Cow position: | chr6:3078728-3078531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 24, 71 | 
| Conread position: | 336-527 | 
| Cow position: | chr6:6994729-6994920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 41, 77 | 
| Conread position: | 336-527 | 
| Cow position: | chr6:45596299-45596501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 41, 15 | 
| Conread position: | 339-491 | 
| Cow position: | chr6:10400191-10400346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 33, 20 | 
| Conread position: | 339-513 | 
| Cow position: | chr6:47772736-47772918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 31, 83 | 
| Conread position: | 339-521 | 
| Cow position: | chr6:6161823-6161639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 110, 78 | 
| Conread position: | 339-521 | 
| Cow position: | chr6:33917612-33917803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 33, 85 | 
| Conread position: | 339-527 | 
| Cow position: | chr6:36454368-36454565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 12, 83 | 
| Conread position: | 339-530 | 
| Cow position: | chr6:53939190-53938992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 40, 65 | 
| Conread position: | 339-531 | 
| Cow position: | chr6:41687795-41687994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 15, 78 | 
| Conread position: | 340-513 | 
| Cow position: | chr6:23986240-23986416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 38, 68 | 
| Conread position: | 340-521 | 
| Cow position: | chr6:54490502-54490696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 37, 146 | 
| Conread position: | 343-502 | 
| Cow position: | chr6:48806791-48806953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 106, 65 | 
| Conread position: | 343-519 | 
| Cow position: | chr6:38594018-38594197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 35, 68 | 
| Conread position: | 343-521 | 
| Cow position: | chr6:20754079-20754264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 36, 70 | 
| Conread position: | 343-524 | 
| Cow position: | chr6:12421067-12421257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 35, 78 | 
| Conread position: | 343-528 | 
| Cow position: | chr6:47192303-47192494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 35, 65 | 
| Conread position: | 343-539 | 
| Cow position: | chr6:28155932-28156140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 34, 153 | 
| Conread position: | 343-541 | 
| Cow position: | chr6:37463246-37463039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 34, 79 | 
| Conread position: | 343-542 | 
| Cow position: | chr6:19427668-19427473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 107, 65 | 
| Conread position: | 343-542 | 
| Cow position: | chr6:32412419-32412618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 44, 73 | 
| Conread position: | 344-522 | 
| Cow position: | chr6:14658821-14658642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 108, 34 | 
| Conread position: | 344-522 | 
| Cow position: | chr6:28165047-28164861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 13, 78 | 
| Conread position: | 344-524 | 
| Cow position: | chr6:36652639-36652456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 48, 38 | 
| Conread position: | 344-530 | 
| Cow position: | chr6:56376131-56376320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 32, 70 | 
| Conread position: | 344-534 | 
| Cow position: | chr6:35774761-35774960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 34, 78 | 
| Conread position: | 344-537 | 
| Cow position: | chr6:24622757-24622952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 33, 56 | 
| Conread position: | 344-537 | 
| Cow position: | chr6:63196941-63197142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 30, 77 | 
| Conread position: | 344-537 | 
| Cow position: | chr6:65872106-65871911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 34, 11 | 
| Conread position: | 344-542 | 
| Cow position: | chr6:45064795-45065001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 31, 66 | 
| Conread position: | 344-542 | 
| Cow position: | chr6:53674082-53673880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 28, 46 | 
| Conread position: | 349-537 | 
| Cow position: | chr6:7836118-7835940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 101, 41 | 
| Conread position: | 353-527 | 
| Cow position: | chr6:11790188-11790005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 25, 68 | 
| Conread position: | 353-533 | 
| Cow position: | chr6:510092-510277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 18, 58 | 
| Conread position: | 353-537 | 
| Cow position: | chr6:58332094-58331909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 90, 37 | 
| Conread position: | 353-542 | 
| Cow position: | chr6:2899353-2899553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 24, 68 | 
| Conread position: | 355-531 | 
| Cow position: | chr6:2324014-2324194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 23, 43 | 
| Conread position: | 355-537 | 
| Cow position: | chr6:7173550-7173728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 95, 17 | 
| Conread position: | 355-537 | 
| Cow position: | chr6:51840496-51840300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 355-540 | 
| Cow position: | chr6:10487786-10487606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 23, 49 | 
| Conread position: | 356-529 | 
| Cow position: | chr6:32277151-32276976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 27, 61 | 
| Conread position: | 357-542 | 
| Cow position: | chr6:60503582-60503398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 20, 60 | 
| Conread position: | 358-536 | 
| Cow position: | chr6:56041312-56041484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 10, 60 | 
| Conread position: | 362-510 | 
| Cow position: | chr6:15754044-15753892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 16, 53 | 
| Conread position: | 367-542 | 
| Cow position: | chr6:51387945-51387765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 13, 48 | 
| Conread position: | 372-513 | 
| Cow position: | chr6:29649294-29649151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 78, 44 | 
| Conread position: | 372-518 | 
| Cow position: | chr6:28069417-28069267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 71, 5 | 
| Conread position: | 372-526 | 
| Cow position: | chr6:54144491-54144339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 78, 44 | 
| Conread position: | 372-529 | 
| Cow position: | chr6:20255218-20255381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 72, 44 | 
| Conread position: | 372-536 | 
| Cow position: | chr6:16733603-16733442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 78, 44 | 
| Conread position: | 372-537 | 
| Cow position: | chr6:3545868-3545716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 372-542 | 
| Cow position: | chr6:24583043-24583205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 372-542 | 
| Cow position: | chr6:51294474-51294301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 78, 44 | 
| Conread position: | 373-542 | 
| Cow position: | chr6:64427412-64427241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 77, 43 | 
| Conread position: | 374-531 | 
| Cow position: | chr6:24004725-24004562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 405-542 | 
| Cow position: | chr6:60118305-60118166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 44, 0 | 
Show alignments to all cow chromosomes.
