Cow genome map

Conread name: Pig2-40K14

Conread position: 301-542
Cow position: chr8:55305320-55305069 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 17

Conread position: 308-530
Cow position: chr8:36505601-36505379 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 42

Conread position: 309-540
Cow position: chr8:39896478-39896236 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 23

Conread position: 311-527
Cow position: chr8:25573258-25573045 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 62

Conread position: 313-528
Cow position: chr8:9130703-9130927 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 109

Conread position: 314-542
Cow position: chr8:61442979-61443228 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 28

Conread position: 319-538
Cow position: chr8:51904819-51905047 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 33, 104

Conread position: 322-530
Cow position: chr8:20682613-20682394 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 100

Conread position: 324-527
Cow position: chr8:6468951-6469164 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 101

Conread position: 324-541
Cow position: chr8:33218739-33218966 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 96

Conread position: 324-542
Cow position: chr8:19512268-19512474 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 19

Conread position: 325-516
Cow position: chr8:6330882-6330695 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 18

Conread position: 325-522
Cow position: chr8:36471752-36471552 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 98

Conread position: 325-530
Cow position: chr8:37007605-37007815 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 96

Conread position: 326-516
Cow position: chr8:34288136-34287937 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 100

Conread position: 326-529
Cow position: chr8:32827470-32827673 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 67

Conread position: 327-537
Cow position: chr8:31814843-31815051 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 47

Conread position: 329-526
Cow position: chr8:46203475-46203271 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 84

Conread position: 331-542
Cow position: chr8:9812001-9811788 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 41

Conread position: 332-517
Cow position: chr8:13900604-13900414 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 162

Conread position: 333-524
Cow position: chr8:15686198-15686398 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 88

Conread position: 333-526
Cow position: chr8:17078024-17077825 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 35, 10

Conread position: 334-541
Cow position: chr8:29026438-29026649 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 43

Conread position: 334-541
Cow position: chr8:39017908-39017693 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 88

Conread position: 334-542
Cow position: chr8:15536795-15537010 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 87

Conread position: 335-521
Cow position: chr8:23161147-23160958 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 82

Conread position: 335-524
Cow position: chr8:44569011-44568806 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 335-530
Cow position: chr8:9236346-9236538 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 80

Conread position: 335-530
Cow position: chr8:13810403-13810204 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 87

Conread position: 336-503
Cow position: chr8:36274131-36274308 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 77

Conread position: 336-512
Cow position: chr8:48086405-48086589 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 73

Conread position: 336-522
Cow position: chr8:23030830-23030643 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 82

Conread position: 339-508
Cow position: chr8:60949545-60949722 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 82

Conread position: 339-532
Cow position: chr8:28221371-28221565 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 70

Conread position: 339-537
Cow position: chr8:49599732-49599931 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 111, 69

Conread position: 339-542
Cow position: chr8:29414084-29413879 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 111, 10

Conread position: 339-542
Cow position: chr8:32192895-32192677 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 342-527
Cow position: chr8:9962400-9962593 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 83

Conread position: 342-530
Cow position: chr8:11896393-11896203 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 108, 60

Conread position: 343-497
Cow position: chr8:54211064-54210901 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 146

Conread position: 343-513
Cow position: chr8:39967615-39967787 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 78

Conread position: 343-519
Cow position: chr8:24766776-24766952 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 65

Conread position: 343-524
Cow position: chr8:20892521-20892338 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 29

Conread position: 343-524
Cow position: chr8:24547209-24547025 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 78

Conread position: 343-525
Cow position: chr8:54070937-54070756 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 62

Conread position: 343-526
Cow position: chr8:53866295-53866113 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 79

Conread position: 343-527
Cow position: chr8:9583350-9583539 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 78

Conread position: 343-530
Cow position: chr8:11594231-11594036 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 78

Conread position: 343-530
Cow position: chr8:21282250-21282057 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 70

Conread position: 343-530
Cow position: chr8:32277835-32278017 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 75

Conread position: 343-530
Cow position: chr8:49265109-49265303 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 52

Conread position: 343-533
Cow position: chr8:42846518-42846711 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 78

Conread position: 343-537
Cow position: chr8:35218559-35218358 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 68

Conread position: 343-537
Cow position: chr8:59506888-59507085 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 63

Conread position: 343-538
Cow position: chr8:8134307-8134508 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 80

Conread position: 343-542
Cow position: chr8:21137089-21137280 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 73

Conread position: 343-542
Cow position: chr8:37123159-37122952 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 78

Conread position: 344-529
Cow position: chr8:51695192-51695382 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 77

Conread position: 344-542
Cow position: chr8:13813230-13813436 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 77

Conread position: 346-512
Cow position: chr8:49577117-49576950 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 72

Conread position: 346-518
Cow position: chr8:49510716-49510882 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 26

Conread position: 346-542
Cow position: chr8:13221665-13221867 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 61

Conread position: 348-524
Cow position: chr8:27294913-27294734 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 98, 60

Conread position: 348-530
Cow position: chr8:31690992-31690808 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 66

Conread position: 352-530
Cow position: chr8:55829164-55829346 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 69

Conread position: 353-509
Cow position: chr8:61216651-61216815 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 69

Conread position: 353-519
Cow position: chr8:16971203-16971366 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 56

Conread position: 353-528
Cow position: chr8:26229130-26228956 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 44

Conread position: 354-542
Cow position: chr8:34317890-34318087 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 17, 66

Conread position: 355-509
Cow position: chr8:19171438-19171592 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 57

Conread position: 357-528
Cow position: chr8:26922800-26922623 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 52

Conread position: 357-530
Cow position: chr8:33842926-33842754 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 21

Conread position: 357-530
Cow position: chr8:43693387-43693212 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 41

Conread position: 357-537
Cow position: chr8:7367300-7367484 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 62

Conread position: 360-537
Cow position: chr8:50266461-50266279 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 48

Conread position: 360-537
Cow position: chr8:60320690-60320514 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 58

Conread position: 361-510
Cow position: chr8:32983931-32984083 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 55

Conread position: 365-527
Cow position: chr8:1107024-1107187 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 85, 30

Conread position: 367-532
Cow position: chr8:43803716-43803546 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 48

Conread position: 367-542
Cow position: chr8:20832159-20832338 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 49

Conread position: 372-524
Cow position: chr8:33510460-33510617 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 372-527
Cow position: chr8:26451283-26451125 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 36

Conread position: 372-530
Cow position: chr8:5700121-5700279 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 47

Conread position: 372-542
Cow position: chr8:24426813-24426642 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 44

Conread position: 373-542
Cow position: chr8:13976048-13975882 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 39

Conread position: 374-515
Cow position: chr8:31645864-31646007 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 374-521
Cow position: chr8:49819515-49819658 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 21

Conread position: 374-527
Cow position: chr8:18033763-18033920 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 79, 42

Conread position: 375-530
Cow position: chr8:42575843-42575687 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 41

Conread position: 376-505
Cow position: chr8:18743648-18743520 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 40

Conread position: 376-518
Cow position: chr8:45163178-45163035 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 36

Conread position: 376-537
Cow position: chr8:37487142-37487305 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 40

Conread position: 379-530
Cow position: chr8:39969667-39969822 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 38

Conread position: 385-537
Cow position: chr8:45987653-45987805 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 29

Conread position: 386-542
Cow position: chr8:11783128-11782971 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 30

Conread position: 390-526
Cow position: chr8:40371263-40371398 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 12

Conread position: 405-512
Cow position: chr8:20327726-20327833 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.