Cow genome map

Conread name: Pig2-40K14

Conread position: 302-542
Cow position: chr9:49847002-49847258 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 254

Conread position: 314-542
Cow position: chr9:3845382-3845160 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 9

Conread position: 318-524
Cow position: chr9:8617651-8617850 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 65

Conread position: 319-524
Cow position: chr9:17110596-17110802 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 102

Conread position: 319-526
Cow position: chr9:34309850-34310061 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 103

Conread position: 320-526
Cow position: chr9:33668550-33668766 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 11

Conread position: 321-542
Cow position: chr9:39152856-39152630 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 101

Conread position: 322-542
Cow position: chr9:18237334-18237113 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 91

Conread position: 324-528
Cow position: chr9:2481652-2481861 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 88

Conread position: 324-537
Cow position: chr9:27292446-27292232 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 15

Conread position: 325-528
Cow position: chr9:48576807-48576608 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 53

Conread position: 326-540
Cow position: chr9:44584412-44584644 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 209

Conread position: 327-542
Cow position: chr9:29808287-29808506 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 36

Conread position: 328-498
Cow position: chr9:34431652-34431829 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 91

Conread position: 329-542
Cow position: chr9:43911766-43911981 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 49, 88

Conread position: 331-527
Cow position: chr9:49651565-49651760 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 48

Conread position: 331-542
Cow position: chr9:12498846-12499063 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 12

Conread position: 332-527
Cow position: chr9:9315147-9315344 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 17

Conread position: 332-527
Cow position: chr9:20896736-20896934 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 46, 80

Conread position: 332-539
Cow position: chr9:35708783-35708573 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 90

Conread position: 332-542
Cow position: chr9:32115763-32115548 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 80

Conread position: 333-521
Cow position: chr9:24429258-24429064 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 10

Conread position: 333-542
Cow position: chr9:1867289-1867503 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 190

Conread position: 334-520
Cow position: chr9:47108456-47108635 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 166, 36

Conread position: 334-526
Cow position: chr9:9823661-9823471 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 17

Conread position: 334-526
Cow position: chr9:25468893-25469083 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 87

Conread position: 334-527
Cow position: chr9:23943105-23943317 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 334-530
Cow position: chr9:23042618-23042815 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 76

Conread position: 334-535
Cow position: chr9:5340454-5340656 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 84

Conread position: 335-511
Cow position: chr9:27052797-27052614 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 79

Conread position: 335-512
Cow position: chr9:60549570-60549388 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 74

Conread position: 335-526
Cow position: chr9:42037492-42037690 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 43, 74

Conread position: 336-471
Cow position: chr9:9881864-9881731 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 84

Conread position: 336-501
Cow position: chr9:45510903-45510741 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 22

Conread position: 336-524
Cow position: chr9:5757157-5756953 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 336-537
Cow position: chr9:8599446-8599653 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 21

Conread position: 336-537
Cow position: chr9:26559774-26559564 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 84

Conread position: 337-529
Cow position: chr9:3958915-3959105 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 113, 60

Conread position: 337-533
Cow position: chr9:37099383-37099196 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 45

Conread position: 339-527
Cow position: chr9:15006903-15006716 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 13

Conread position: 339-530
Cow position: chr9:15951306-15951116 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 31

Conread position: 339-542
Cow position: chr9:5433469-5433685 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 340-521
Cow position: chr9:5209427-5209612 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 80

Conread position: 340-526
Cow position: chr9:17569208-17569018 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 79

Conread position: 340-526
Cow position: chr9:43037325-43037519 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 82

Conread position: 340-530
Cow position: chr9:20200145-20200334 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 110, 19

Conread position: 342-526
Cow position: chr9:26645766-26645963 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 77

Conread position: 343-476
Cow position: chr9:42900748-42900884 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 74

Conread position: 343-499
Cow position: chr9:62331151-62330988 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 78

Conread position: 343-505
Cow position: chr9:34917349-34917168 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 343-515
Cow position: chr9:32266539-32266362 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 76

Conread position: 343-521
Cow position: chr9:34568856-34568683 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 29

Conread position: 343-523
Cow position: chr9:4539012-4538827 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 30, 78

Conread position: 343-524
Cow position: chr9:19902919-19903117 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 52

Conread position: 343-524
Cow position: chr9:38580705-38580889 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 53

Conread position: 343-542
Cow position: chr9:10667174-10666973 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 34

Conread position: 343-542
Cow position: chr9:27347646-27347849 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 168

Conread position: 343-542
Cow position: chr9:34203976-34204182 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 35, 78

Conread position: 344-526
Cow position: chr9:63597685-63597867 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 77

Conread position: 344-527
Cow position: chr9:8657583-8657393 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 77

Conread position: 344-530
Cow position: chr9:16118583-16118767 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 28

Conread position: 344-530
Cow position: chr9:39428952-39428759 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 74

Conread position: 344-542
Cow position: chr9:9200870-9200671 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 62

Conread position: 345-528
Cow position: chr9:3169669-3169488 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 63

Conread position: 345-535
Cow position: chr9:50828068-50827884 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 61

Conread position: 345-542
Cow position: chr9:15684938-15684735 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 76

Conread position: 353-526
Cow position: chr9:16745538-16745709 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 45

Conread position: 353-527
Cow position: chr9:5828927-5829102 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 64

Conread position: 353-528
Cow position: chr9:33059415-33059237 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 68

Conread position: 353-537
Cow position: chr9:53794671-53794484 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 60

Conread position: 353-542
Cow position: chr9:4580546-4580351 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 23

Conread position: 356-527
Cow position: chr9:47925788-47925962 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 87, 52

Conread position: 357-542
Cow position: chr9:24837402-24837588 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 60

Conread position: 360-511
Cow position: chr9:38777197-38777043 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 56

Conread position: 361-531
Cow position: chr9:2863314-2863485 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 89, 37

Conread position: 361-541
Cow position: chr9:34725643-34725462 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 47

Conread position: 367-530
Cow position: chr9:54206449-54206284 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 49

Conread position: 372-525
Cow position: chr9:5059434-5059285 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 36

Conread position: 372-526
Cow position: chr9:21537148-21537304 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 45

Conread position: 372-528
Cow position: chr9:11102919-11102764 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 31

Conread position: 372-528
Cow position: chr9:28983063-28983221 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 36

Conread position: 372-530
Cow position: chr9:32817261-32817101 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 30

Conread position: 372-533
Cow position: chr9:55562377-55562544 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 36

Conread position: 373-526
Cow position: chr9:59761752-59761597 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 43

Conread position: 374-521
Cow position: chr9:6214266-6214122 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 39

Conread position: 382-532
Cow position: chr9:34106604-34106767 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 36

Conread position: 386-530
Cow position: chr9:4858431-4858577 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 21

Conread position: 387-530
Cow position: chr9:21462970-21462829 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 29

Conread position: 387-542
Cow position: chr9:3931858-3932013 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 29

Conread position: 396-524
Cow position: chr9:26093232-26093361 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 422-530
Cow position: chr9:44552675-44552787 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.