Cow genome map

Conread name: Pig2-40K14

Conread position: 262-532
Cow position: chrX:27287443-27287719 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 27

Conread position: 262-541
Cow position: chrX:6203834-6203546 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 36, 161

Conread position: 308-527
Cow position: chrX:46084215-46083989 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 23

Conread position: 310-526
Cow position: chrX:19879280-19879063 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 102

Conread position: 313-542
Cow position: chrX:7806653-7806429 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 137, 38

Conread position: 314-530
Cow position: chrX:39000084-38999871 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 9

Conread position: 315-526
Cow position: chrX:2647979-2648188 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 135, 93

Conread position: 319-533
Cow position: chrX:24259358-24259569 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 126, 51

Conread position: 324-542
Cow position: chrX:39126552-39126329 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 94

Conread position: 325-524
Cow position: chrX:46072582-46072796 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 325-527
Cow position: chrX:18286856-18287058 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 18

Conread position: 325-527
Cow position: chrX:29874141-29874352 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 11, 99

Conread position: 325-537
Cow position: chrX:25714021-25713804 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 27

Conread position: 325-542
Cow position: chrX:15305068-15305296 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 88

Conread position: 325-542
Cow position: chrX:26618888-26619110 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 76

Conread position: 326-530
Cow position: chrX:30979909-30980120 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 95

Conread position: 328-542
Cow position: chrX:36009692-36009909 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 21

Conread position: 332-530
Cow position: chrX:10959175-10959380 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 79

Conread position: 332-530
Cow position: chrX:32310324-32310120 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 77

Conread position: 332-542
Cow position: chrX:27276918-27276698 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 333-491
Cow position: chrX:30483791-30483955 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 10

Conread position: 333-530
Cow position: chrX:41084135-41083930 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 35, 10

Conread position: 333-542
Cow position: chrX:41560054-41560252 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 77

Conread position: 334-518
Cow position: chrX:19678061-19678240 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 74

Conread position: 334-526
Cow position: chrX:2786346-2786537 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 116, 49

Conread position: 334-530
Cow position: chrX:6563738-6563539 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 76

Conread position: 335-523
Cow position: chrX:6677044-6676848 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 87

Conread position: 336-542
Cow position: chrX:20801973-20801772 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 34

Conread position: 338-542
Cow position: chrX:39415155-39415367 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 80

Conread position: 339-478
Cow position: chrX:30862550-30862407 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 30

Conread position: 339-503
Cow position: chrX:41732987-41733157 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 77

Conread position: 339-522
Cow position: chrX:32431833-32431647 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 111, 67

Conread position: 340-527
Cow position: chrX:46700637-46700829 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 80

Conread position: 340-542
Cow position: chrX:29121254-29121050 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 37

Conread position: 341-530
Cow position: chrX:21664513-21664704 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 76

Conread position: 343-492
Cow position: chrX:22285080-22284936 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 27

Conread position: 343-497
Cow position: chrX:1503538-1503375 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 79

Conread position: 343-497
Cow position: chrX:37140679-37140517 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 79

Conread position: 343-518
Cow position: chrX:10302547-10302367 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 74

Conread position: 343-526
Cow position: chrX:20791610-20791796 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 61

Conread position: 343-528
Cow position: chrX:43426501-43426312 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 62

Conread position: 343-529
Cow position: chrX:34470920-34470736 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 72

Conread position: 343-530
Cow position: chrX:17630599-17630788 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 27

Conread position: 343-531
Cow position: chrX:24131948-24132135 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 52

Conread position: 343-542
Cow position: chrX:6041004-6041206 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 65

Conread position: 343-542
Cow position: chrX:9539529-9539330 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 72

Conread position: 343-542
Cow position: chrX:9839431-9839232 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 72

Conread position: 343-542
Cow position: chrX:23414166-23414365 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 78

Conread position: 344-522
Cow position: chrX:28835550-28835739 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 74

Conread position: 344-527
Cow position: chrX:15049692-15049513 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 45

Conread position: 344-532
Cow position: chrX:6674706-6674906 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 77

Conread position: 344-542
Cow position: chrX:39545782-39545972 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 101, 64

Conread position: 345-525
Cow position: chrX:18142252-18142433 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 105, 73

Conread position: 345-542
Cow position: chrX:161628-161415 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 188

Conread position: 345-542
Cow position: chrX:25338392-25338192 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 63

Conread position: 346-537
Cow position: chrX:20377170-20376979 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 75

Conread position: 348-508
Cow position: chrX:22326319-22326157 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 68

Conread position: 348-512
Cow position: chrX:29675704-29675533 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 65

Conread position: 348-537
Cow position: chrX:25388047-25388229 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 102, 30

Conread position: 349-537
Cow position: chrX:7497437-7497251 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 58

Conread position: 351-533
Cow position: chrX:19930845-19930665 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 62

Conread position: 353-502
Cow position: chrX:37186359-37186206 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 68

Conread position: 353-512
Cow position: chrX:39338909-39339072 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 100, 61

Conread position: 353-519
Cow position: chrX:39832612-39832442 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 71

Conread position: 353-521
Cow position: chrX:7646456-7646275 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 68

Conread position: 353-526
Cow position: chrX:17964326-17964503 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 54

Conread position: 353-542
Cow position: chrX:3154055-3154239 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 17

Conread position: 355-495
Cow position: chrX:488873-488729 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 64

Conread position: 356-508
Cow position: chrX:10289436-10289589 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 56

Conread position: 356-533
Cow position: chrX:8780240-8780057 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 62

Conread position: 357-524
Cow position: chrX:29407828-29408000 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 34

Conread position: 360-528
Cow position: chrX:17042868-17042700 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 90, 16

Conread position: 372-497
Cow position: chrX:3951216-3951089 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 36

Conread position: 372-516
Cow position: chrX:16291845-16291990 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 41

Conread position: 372-524
Cow position: chrX:35759760-35759915 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 44

Conread position: 372-526
Cow position: chrX:15329818-15329662 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 78, 30

Conread position: 372-527
Cow position: chrX:12304736-12304579 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 21

Conread position: 372-527
Cow position: chrX:27771402-27771554 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 42

Conread position: 372-530
Cow position: chrX:42011457-42011296 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 44

Conread position: 372-537
Cow position: chrX:630134-630301 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 69, 44

Conread position: 372-542
Cow position: chrX:29761508-29761681 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 36

Conread position: 372-542
Cow position: chrX:31602833-31602661 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 44

Conread position: 373-526
Cow position: chrX:48089229-48089385 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 31

Conread position: 374-526
Cow position: chrX:28930009-28929862 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 42

Conread position: 374-527
Cow position: chrX:2301098-2300943 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 45

Conread position: 374-530
Cow position: chrX:31340884-31340726 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 375-530
Cow position: chrX:17542132-17541975 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 47

Conread position: 376-527
Cow position: chrX:27176142-27176294 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 36

Conread position: 376-530
Cow position: chrX:16419318-16419166 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 40

Conread position: 377-542
Cow position: chrX:23179112-23179277 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 24

Conread position: 422-542
Cow position: chrX:28111637-28111513 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.