Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-331 |
| Cow position: | chr10:46762793-46763133 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-376 |
| Cow position: | chr10:57371159-57370780 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 1-427 |
| Cow position: | chr10:51557991-51558430 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr10:30688591-30689033 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 1-431 |
| Cow position: | chr10:39813800-39813356 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr10:41569696-41570138 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr10:41879531-41879973 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr10:48374852-48374411 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr10:57554744-57554301 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr10:8292720-8293166 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 1-433 |
| Cow position: | chr10:14333250-14332805 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr10:16928749-16929194 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr10:21489537-21489974 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 1-433 |
| Cow position: | chr10:23411638-23412082 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr10:38842758-38843199 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr10:39440774-39441206 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr10:62406179-62405735 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-440 |
| Cow position: | chr10:21738134-21737681 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-440 |
| Cow position: | chr10:26292895-26292445 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 2-314 |
| Cow position: | chr10:41654377-41654058 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 4-438 |
| Cow position: | chr10:39650880-39650427 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 5-386 |
| Cow position: | chr10:22907533-22907139 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 5-432 |
| Cow position: | chr10:25255361-25255795 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 5-432 |
| Cow position: | chr10:51780849-51780407 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 5-433 |
| Cow position: | chr10:25004508-25004949 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 289 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 8-450 |
| Cow position: | chr10:29756006-29755573 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 9-325 |
| Cow position: | chr10:3896164-3895852 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 9-432 |
| Cow position: | chr10:4584584-4584156 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 9-433 |
| Cow position: | chr10:10584728-10585166 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 9-433 |
| Cow position: | chr10:19542834-19542409 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 10 |
| Conread position: | 9-434 |
| Cow position: | chr10:15620781-15620349 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 12-431 |
| Cow position: | chr10:8681225-8681658 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-431 |
| Cow position: | chr10:23848567-23849000 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-431 |
| Cow position: | chr10:25633237-25632803 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr10:32364543-32364973 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr10:35824739-35824309 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 13-455 |
| Cow position: | chr10:57297073-57296613 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 20-434 |
| Cow position: | chr10:40698059-40697638 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 33-273 |
| Cow position: | chr10:55099301-55099055 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 33-423 |
| Cow position: | chr10:39077121-39077512 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 33-430 |
| Cow position: | chr10:50553988-50553594 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 33-431 |
| Cow position: | chr10:19842295-19842705 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 33-431 |
| Cow position: | chr10:41160041-41160449 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 33-431 |
| Cow position: | chr10:45647481-45647890 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr10:47909243-47909651 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr10:52827003-52826593 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 33-433 |
| Cow position: | chr10:12669277-12669672 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 33-433 |
| Cow position: | chr10:26670295-26670704 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 33-434 |
| Cow position: | chr10:19296774-19296367 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 34-256 |
| Cow position: | chr10:28041247-28041019 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 34-356 |
| Cow position: | chr10:40642560-40642896 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 34-440 |
| Cow position: | chr10:33424913-33424512 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 41-433 |
| Cow position: | chr10:42643173-42643582 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 42-433 |
| Cow position: | chr10:2117809-2117406 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 48-433 |
| Cow position: | chr10:39038409-39038015 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 53-433 |
| Cow position: | chr10:6002945-6002568 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 72-433 |
| Cow position: | chr10:9682507-9682132 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 143 |
| Conread position: | 78-439 |
| Cow position: | chr10:28147367-28146993 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 80-445 |
| Cow position: | chr10:28528744-28528368 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 123-434 |
| Cow position: | chr10:7858609-7858293 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 250 |
| Conread position: | 142-430 |
| Cow position: | chr10:17137778-17138061 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 150, 115 |
| Conread position: | 146-465 |
| Cow position: | chr10:8365984-8365660 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 122, 23 |
Show alignments to all cow chromosomes.