Cow genome map

Conread name: Pig2-41K08

Conread position: 1-431
Cow position: chr13:562082-561637 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 277
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 11

Conread position: 1-431
Cow position: chr13:6360171-6360614 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 280
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr13:35539471-35539919 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 283
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr13:36671961-36672404 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 280
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr13:50111774-50112213 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 270
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr13:4486159-4486602 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 285
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr13:6665829-6665379 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 287
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr13:9300476-9300920 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 288
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr13:18330821-18330376 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 282
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr13:32734882-32734437 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 287
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr13:34040036-34039593 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 278
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr13:35759862-35760306 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 284
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 11

Conread position: 1-434
Cow position: chr13:15922153-15921707 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 287
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 11

Conread position: 1-434
Cow position: chr13:34509505-34509072 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 279
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 106, 14

Conread position: 1-454
Cow position: chr13:33523651-33523182 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 294
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 11

Conread position: 1-458
Cow position: chr13:5499682-5499218 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 293
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 11

Conread position: 2-434
Cow position: chr13:30652983-30652538 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 283
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 79

Conread position: 5-221
Cow position: chr13:12658936-12659158 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 30

Conread position: 5-269
Cow position: chr13:49061670-49061938 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 26

Conread position: 5-305
Cow position: chr13:18946167-18945862 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 24

Conread position: 5-331
Cow position: chr13:30035978-30035653 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 62

Conread position: 5-433
Cow position: chr13:34322650-34322216 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 274
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 58

Conread position: 5-433
Cow position: chr13:47569411-47569838 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 75

Conread position: 5-440
Cow position: chr13:18976368-18975937 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 283
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 27

Conread position: 7-392
Cow position: chr13:17537870-17538264 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 74

Conread position: 9-391
Cow position: chr13:55962672-55963054 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 66

Conread position: 9-431
Cow position: chr13:46461980-46462401 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 282
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 92, 18

Conread position: 9-433
Cow position: chr13:393816-393388 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 66

Conread position: 9-433
Cow position: chr13:19637457-19637902 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 281
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 65

Conread position: 9-440
Cow position: chr13:35685694-35686135 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 288
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 65

Conread position: 11-439
Cow position: chr13:19122186-19121755 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 105, 22

Conread position: 12-431
Cow position: chr13:18122556-18122123 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 269
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 63

Conread position: 12-431
Cow position: chr13:32254037-32253604 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 269
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 63

Conread position: 12-431
Cow position: chr13:51006709-51006276 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 271
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 63

Conread position: 13-431
Cow position: chr13:16806912-16807344 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 269
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 62

Conread position: 19-433
Cow position: chr13:27470286-27470709 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 289
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 49

Conread position: 20-436
Cow position: chr13:48548473-48548903 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 18

Conread position: 24-433
Cow position: chr13:25890695-25891112 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 271
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 11

Conread position: 27-381
Cow position: chr13:12515923-12515573 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 45

Conread position: 30-432
Cow position: chr13:114373-114787 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 272
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 9

Conread position: 33-350
Cow position: chr13:34763638-34763330 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 105, 40

Conread position: 33-409
Cow position: chr13:32776736-32776344 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 250
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 40

Conread position: 33-431
Cow position: chr13:49976007-49976417 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 261
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 40

Conread position: 33-431
Cow position: chr13:60647247-60646838 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 262
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 40

Conread position: 33-433
Cow position: chr13:21401183-21401595 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 81, 44

Conread position: 33-433
Cow position: chr13:22275149-22275549 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 256
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 43

Conread position: 33-434
Cow position: chr13:644635-644222 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 256
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 40

Conread position: 33-440
Cow position: chr13:8068864-8068444 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 263
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 40

Conread position: 33-444
Cow position: chr13:31731230-31730809 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 267
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 40

Conread position: 35-348
Cow position: chr13:47466772-47467079 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 38

Conread position: 37-284
Cow position: chr13:2507509-2507762 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 35

Conread position: 39-321
Cow position: chr13:39042014-39041732 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 34

Conread position: 40-433
Cow position: chr13:17329837-17329444 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 258
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 68, 36

Conread position: 41-327
Cow position: chr13:17480405-17480111 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 255

Conread position: 41-349
Cow position: chr13:34332089-34332404 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 207
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 35

Conread position: 41-433
Cow position: chr13:34297934-34298331 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 245
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 35

Conread position: 62-326
Cow position: chr13:1047686-1047414 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 14

Conread position: 105-357
Cow position: chr13:26080228-26080485 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 187

Conread position: 105-403
Cow position: chr13:16817508-16817823 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 101

Conread position: 130-415
Cow position: chr13:24581006-24580718 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 52

Conread position: 142-433
Cow position: chr13:12565690-12565402 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 217, 20

Conread position: 149-427
Cow position: chr13:46599131-46598847 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 137, 0

Show alignments to all cow chromosomes.