Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-430 |
| Cow position: | chr14:9450355-9449913 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr14:9047012-9047455 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr14:19549374-19549812 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr14:23255164-23254721 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-432 |
| Cow position: | chr14:35363675-35363249 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-433 |
| Cow position: | chr14:11475116-11474671 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr14:16917550-16917107 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr14:32584851-32584406 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr14:37226347-37226792 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr14:46302078-46302524 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-434 |
| Cow position: | chr14:12740865-12740429 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-434 |
| Cow position: | chr14:46123306-46123739 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 1-436 |
| Cow position: | chr14:48147746-48147321 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 1-440 |
| Cow position: | chr14:11151738-11151288 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 2-251 |
| Cow position: | chr14:18106723-18106975 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 2-433 |
| Cow position: | chr14:17689299-17689748 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 2-434 |
| Cow position: | chr14:29045502-29045053 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 3-319 |
| Cow position: | chr14:44889049-44888728 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 112, 22 |
| Conread position: | 5-261 |
| Cow position: | chr14:45191167-45191422 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 108, 14 |
| Conread position: | 5-348 |
| Cow position: | chr14:47415534-47415882 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 5-355 |
| Cow position: | chr14:45187658-45187304 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 5-433 |
| Cow position: | chr14:16997857-16997420 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 5-433 |
| Cow position: | chr14:21688452-21688881 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 5-434 |
| Cow position: | chr14:11835817-11836260 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 9-284 |
| Cow position: | chr14:47644563-47644843 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 9-331 |
| Cow position: | chr14:33603837-33603525 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 11-432 |
| Cow position: | chr14:39935947-39936377 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 12-431 |
| Cow position: | chr14:1660641-1661073 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 12-431 |
| Cow position: | chr14:7226592-7227025 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 19-205 |
| Cow position: | chr14:24524145-24524332 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 19-331 |
| Cow position: | chr14:32179166-32179483 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 19-444 |
| Cow position: | chr14:42597318-42596890 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 26-440 |
| Cow position: | chr14:49218533-49218966 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 80, 47 |
| Conread position: | 33-423 |
| Cow position: | chr14:37335498-37335098 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 33-431 |
| Cow position: | chr14:17763182-17762769 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 33-431 |
| Cow position: | chr14:22104350-22103940 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 33-431 |
| Cow position: | chr14:47578825-47579235 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-435 |
| Cow position: | chr14:29795638-29795225 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-445 |
| Cow position: | chr14:8899495-8899916 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 34-432 |
| Cow position: | chr14:5531548-5531958 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr14:34668576-34668171 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 35-298 |
| Cow position: | chr14:25694156-25694427 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 35-421 |
| Cow position: | chr14:24992923-24992535 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 35-431 |
| Cow position: | chr14:7844003-7844403 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 35-432 |
| Cow position: | chr14:37256372-37256776 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 40-434 |
| Cow position: | chr14:2296916-2297307 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 41-430 |
| Cow position: | chr14:16189779-16190178 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 41-434 |
| Cow position: | chr14:35292307-35291908 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 47-252 |
| Cow position: | chr14:194477-194687 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 59-433 |
| Cow position: | chr14:28580842-28580458 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 75-434 |
| Cow position: | chr14:39149162-39149517 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 80-432 |
| Cow position: | chr14:27052913-27052560 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 106-455 |
| Cow position: | chr14:20912165-20912524 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 169 |
| Conread position: | 107-433 |
| Cow position: | chr14:11563820-11564155 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 191 |
| Conread position: | 147-433 |
| Cow position: | chr14:12963407-12963125 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 153, 24 |
Show alignments to all cow chromosomes.