Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-431 |
| Cow position: | chr15:480759-481205 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 1-431 |
| Cow position: | chr15:23709334-23708891 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr15:37460069-37460495 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 1-432 |
| Cow position: | chr15:14579967-14579523 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr15:19735621-19735176 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr15:22540640-22540194 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr15:24297373-24297809 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-445 |
| Cow position: | chr15:4924343-4924799 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-451 |
| Cow position: | chr15:9437794-9438250 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 2-431 |
| Cow position: | chr15:2014680-2015114 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 2-432 |
| Cow position: | chr15:51219921-51220363 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 2-433 |
| Cow position: | chr15:32066079-32065634 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 2-433 |
| Cow position: | chr15:35751119-35750672 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 2-433 |
| Cow position: | chr15:44072627-44073070 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 2-440 |
| Cow position: | chr15:21636449-21636903 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 4-433 |
| Cow position: | chr15:13389182-13388749 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 4-433 |
| Cow position: | chr15:39447120-39446678 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 334 |
| Conread position: | 5-261 |
| Cow position: | chr15:44861111-44861364 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 5-385 |
| Cow position: | chr15:7930750-7931142 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 5-431 |
| Cow position: | chr15:8358846-8359271 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 101, 25 |
| Conread position: | 5-432 |
| Cow position: | chr15:23275386-23274953 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 5-433 |
| Cow position: | chr15:2410518-2410092 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 5-433 |
| Cow position: | chr15:32491707-32491265 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 5-440 |
| Cow position: | chr15:5982826-5983272 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 6-385 |
| Cow position: | chr15:40108975-40109353 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 8-431 |
| Cow position: | chr15:31270683-31270250 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 9-410 |
| Cow position: | chr15:7671931-7671526 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 10-431 |
| Cow position: | chr15:32844596-32844176 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 11-430 |
| Cow position: | chr15:31990395-31989976 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 95, 22 |
| Conread position: | 12-431 |
| Cow position: | chr15:7848538-7848970 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 12-431 |
| Cow position: | chr15:10825659-10826097 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-431 |
| Cow position: | chr15:18229254-18229686 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-431 |
| Cow position: | chr15:25204818-25204388 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr15:36941197-36940761 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 12-431 |
| Cow position: | chr15:52977145-52977578 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-432 |
| Cow position: | chr15:15787088-15787496 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 12-439 |
| Cow position: | chr15:49448953-49448528 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 18-297 |
| Cow position: | chr15:29003107-29003396 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 18-410 |
| Cow position: | chr15:35273335-35273731 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 87, 55 |
| Conread position: | 18-421 |
| Cow position: | chr15:21830135-21830550 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 18-439 |
| Cow position: | chr15:51227318-51227755 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 290 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 19-430 |
| Cow position: | chr15:40330277-40329869 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 19-430 |
| Cow position: | chr15:41786492-41786090 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 19-433 |
| Cow position: | chr15:21966236-21966657 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 102 |
| Conread position: | 20-434 |
| Cow position: | chr15:52738519-52738936 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 24-413 |
| Cow position: | chr15:202506-202116 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 26-440 |
| Cow position: | chr15:53575456-53575041 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 30-434 |
| Cow position: | chr15:37631229-37631641 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 203 |
| Conread position: | 32-433 |
| Cow position: | chr15:36670379-36670792 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 32-433 |
| Cow position: | chr15:39418567-39418978 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 33-431 |
| Cow position: | chr15:5019603-5020013 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 33-432 |
| Cow position: | chr15:7547089-7547492 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 33-433 |
| Cow position: | chr15:20330177-20329776 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 33-433 |
| Cow position: | chr15:36619926-36619520 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 33-439 |
| Cow position: | chr15:17287215-17287630 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 33-444 |
| Cow position: | chr15:31586185-31585762 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 40 |
| Conread position: | 33-444 |
| Cow position: | chr15:52208752-52209176 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 34-265 |
| Cow position: | chr15:280307-280077 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 34-347 |
| Cow position: | chr15:22455794-22455479 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 34-433 |
| Cow position: | chr15:4768405-4768805 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr15:21663530-21663119 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 35-372 |
| Cow position: | chr15:7448593-7448248 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 35-434 |
| Cow position: | chr15:52440354-52440762 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 39-433 |
| Cow position: | chr15:6153713-6153308 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 41-250 |
| Cow position: | chr15:33991429-33991218 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 41-431 |
| Cow position: | chr15:6462614-6463013 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 47-392 |
| Cow position: | chr15:14887526-14887877 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 47-431 |
| Cow position: | chr15:2633480-2633088 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 245 |
| Conread position: | 47-440 |
| Cow position: | chr15:13980537-13980945 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 52-433 |
| Cow position: | chr15:25553381-25553766 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 100-431 |
| Cow position: | chr15:43080501-43080161 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 39, 197 |
| Conread position: | 111-360 |
| Cow position: | chr15:27134752-27134985 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 121-432 |
| Cow position: | chr15:7058030-7058349 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 194-455 |
| Cow position: | chr15:38678434-38678699 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 137 |
Show alignments to all cow chromosomes.