Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-431 |
| Cow position: | chr16:28194469-28194027 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr16:47403214-47403657 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-432 |
| Cow position: | chr16:26653511-26653944 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 1-433 |
| Cow position: | chr16:839114-839559 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:3770180-3769735 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:5487601-5488045 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 287 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:7466444-7466889 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 1-433 |
| Cow position: | chr16:7674628-7674185 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:8814273-8813826 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:15569602-15570044 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:25343807-25344253 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:37479030-37478585 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr16:40294340-40293895 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 1-434 |
| Cow position: | chr16:44128006-44127562 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 1-439 |
| Cow position: | chr16:34505531-34505981 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 2-433 |
| Cow position: | chr16:34532133-34532569 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 2-433 |
| Cow position: | chr16:37443690-37443252 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 4-324 |
| Cow position: | chr16:32325688-32326015 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 4-433 |
| Cow position: | chr16:51086613-51087058 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 5-260 |
| Cow position: | chr16:49386848-49387109 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 68 |
| Conread position: | 5-314 |
| Cow position: | chr16:52518801-52519107 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 5-356 |
| Cow position: | chr16:51998537-51998186 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 5-433 |
| Cow position: | chr16:43895429-43894987 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 6-431 |
| Cow position: | chr16:36240984-36241408 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 9-433 |
| Cow position: | chr16:52526069-52526507 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 9-440 |
| Cow position: | chr16:52627212-52627638 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 10-433 |
| Cow position: | chr16:29324049-29323625 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 96, 6 |
| Conread position: | 11-432 |
| Cow position: | chr16:29157501-29157916 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 12-431 |
| Cow position: | chr16:6945096-6945533 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr16:11744380-11744814 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr16:24621858-24621424 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-434 |
| Cow position: | chr16:5663634-5664065 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 14-433 |
| Cow position: | chr16:49254390-49253963 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 18-393 |
| Cow position: | chr16:52589863-52589483 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 55 |
| Conread position: | 20-431 |
| Cow position: | chr16:25262477-25262889 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 30-435 |
| Cow position: | chr16:9610832-9610426 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 32-433 |
| Cow position: | chr16:16992912-16993320 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 33-427 |
| Cow position: | chr16:34207753-34208145 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 33-431 |
| Cow position: | chr16:5526242-5525831 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 33-431 |
| Cow position: | chr16:13539561-13539151 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr16:23876666-23876256 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr16:46554287-46554695 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-433 |
| Cow position: | chr16:25955711-25955301 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 33-433 |
| Cow position: | chr16:42734764-42734356 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 33-434 |
| Cow position: | chr16:1651230-1651629 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 274 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 33-434 |
| Cow position: | chr16:24406779-24407186 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 34-270 |
| Cow position: | chr16:24924651-24924891 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 34-433 |
| Cow position: | chr16:1565812-1565401 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr16:25443741-25444153 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-437 |
| Cow position: | chr16:43845079-43844677 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 34-448 |
| Cow position: | chr16:12536072-12535648 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 35-422 |
| Cow position: | chr16:39615115-39615503 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 35-432 |
| Cow position: | chr16:3144533-3144124 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 35-433 |
| Cow position: | chr16:416761-417169 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 35-433 |
| Cow position: | chr16:3149165-3148755 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 40-431 |
| Cow position: | chr16:18092663-18092266 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 6 |
| Conread position: | 40-436 |
| Cow position: | chr16:5633442-5633041 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 45-430 |
| Cow position: | chr16:48909772-48909376 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 47-434 |
| Cow position: | chr16:16960974-16960589 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 173, 26 |
| Conread position: | 56-440 |
| Cow position: | chr16:28268950-28268571 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 57-433 |
| Cow position: | chr16:43045-43422 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 63-440 |
| Cow position: | chr16:51040441-51040838 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 238 |
| Conread position: | 81-433 |
| Cow position: | chr16:14663197-14662833 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 95-432 |
| Cow position: | chr16:33921812-33921469 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 119-433 |
| Cow position: | chr16:10966284-10965959 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 124-318 |
| Cow position: | chr16:43646777-43646976 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 144-433 |
| Cow position: | chr16:14352700-14352405 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 148-451 |
| Cow position: | chr16:41822806-41823106 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 118 |
Show alignments to all cow chromosomes.