Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-318 |
| Cow position: | chr18:18476182-18475862 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 1-350 |
| Cow position: | chr18:25957384-25957745 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-352 |
| Cow position: | chr18:51344719-51345079 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr18:32165314-32164875 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 1-433 |
| Cow position: | chr18:16092433-16092878 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr18:23801637-23802082 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 1-433 |
| Cow position: | chr18:25923007-25923444 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr18:29863991-29863546 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 1-433 |
| Cow position: | chr18:54032325-54032776 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 2-434 |
| Cow position: | chr18:5535606-5536033 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 4-389 |
| Cow position: | chr18:6459490-6459870 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 4-433 |
| Cow position: | chr18:16870899-16871332 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 5-427 |
| Cow position: | chr18:47187686-47187273 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 5-433 |
| Cow position: | chr18:36253069-36252635 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 5-433 |
| Cow position: | chr18:36775893-36776334 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 5-433 |
| Cow position: | chr18:54168031-54167586 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 290 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 5-434 |
| Cow position: | chr18:36209736-36209316 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 6-431 |
| Cow position: | chr18:16464249-16463813 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 8-391 |
| Cow position: | chr18:45399781-45400166 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 9-433 |
| Cow position: | chr18:37508586-37509027 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 274 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 9-433 |
| Cow position: | chr18:38090734-38090299 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 9-447 |
| Cow position: | chr18:44403445-44403883 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 10-433 |
| Cow position: | chr18:36114822-36114383 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 12-431 |
| Cow position: | chr18:10221654-10222087 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 12-431 |
| Cow position: | chr18:26243953-26243524 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 19-392 |
| Cow position: | chr18:14814868-14815244 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 30-433 |
| Cow position: | chr18:40483638-40484054 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 33-270 |
| Cow position: | chr18:28211140-28210899 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 33-431 |
| Cow position: | chr18:10977657-10978060 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 33-431 |
| Cow position: | chr18:11272198-11271787 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr18:18216156-18216566 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr18:37700846-37700436 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 33-431 |
| Cow position: | chr18:52630611-52630201 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 34-432 |
| Cow position: | chr18:16173962-16173555 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr18:27989404-27989815 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr18:56426790-56426401 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 256, 21 |
| Conread position: | 36-431 |
| Cow position: | chr18:603814-603408 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 43-430 |
| Cow position: | chr18:17091750-17092134 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 43-431 |
| Cow position: | chr18:26649462-26649846 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 47-349 |
| Cow position: | chr18:39411497-39411812 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 120 |
| Conread position: | 59-404 |
| Cow position: | chr18:16275048-16274695 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 61-433 |
| Cow position: | chr18:54273081-54273454 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 79-431 |
| Cow position: | chr18:48528810-48528441 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 263 |
| Conread position: | 106-433 |
| Cow position: | chr18:48390640-48390984 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 305 |
| Conread position: | 123-436 |
| Cow position: | chr18:19403793-19403476 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 16, 257 |
| Conread position: | 142-433 |
| Cow position: | chr18:49782516-49782220 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 133, 149 |
| Conread position: | 142-434 |
| Cow position: | chr18:21796890-21797189 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 219-440 |
| Cow position: | chr18:17997791-17997571 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 119 |
Show alignments to all cow chromosomes.