Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-431 |
| Cow position: | chr29:666877-666434 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr29:19525759-19525316 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr29:5239923-5240369 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr29:6934022-6934466 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr29:10644881-10644436 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr29:14209018-14208581 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 1-433 |
| Cow position: | chr29:15995847-15995407 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 1-433 |
| Cow position: | chr29:19656434-19656875 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 1-433 |
| Cow position: | chr29:39077184-39076743 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 1-463 |
| Cow position: | chr29:13899196-13899670 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 301 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 2-431 |
| Cow position: | chr29:15624171-15623726 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 2-433 |
| Cow position: | chr29:19620739-19620293 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 5-256 |
| Cow position: | chr29:32805051-32805305 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 102, 11 |
| Conread position: | 5-361 |
| Cow position: | chr29:40611330-40610963 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 5-429 |
| Cow position: | chr29:7331884-7331453 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 5-433 |
| Cow position: | chr29:4199931-4200365 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 5-433 |
| Cow position: | chr29:6263467-6263033 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 5-433 |
| Cow position: | chr29:30107100-30106672 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 8-433 |
| Cow position: | chr29:34795322-34794888 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 9-431 |
| Cow position: | chr29:35299457-35299892 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 9-433 |
| Cow position: | chr29:32542674-32543112 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 9-434 |
| Cow position: | chr29:25458078-25457649 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 10-434 |
| Cow position: | chr29:21267197-21267615 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 11-434 |
| Cow position: | chr29:19618233-19617792 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 12-431 |
| Cow position: | chr29:1477992-1478425 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-431 |
| Cow position: | chr29:15967014-15966581 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr29:31764584-31765013 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 20-357 |
| Cow position: | chr29:29702823-29702479 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 30-254 |
| Cow position: | chr29:4518460-4518687 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 30-331 |
| Cow position: | chr29:36627810-36628101 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 30-434 |
| Cow position: | chr29:15942907-15943329 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 5, 44 |
| Conread position: | 33-430 |
| Cow position: | chr29:13584779-13585188 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr29:7846954-7847362 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 33-431 |
| Cow position: | chr29:21226540-21226950 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 33-431 |
| Cow position: | chr29:21430294-21429887 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr29:32514888-32515299 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 33-440 |
| Cow position: | chr29:40293895-40294314 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 34-414 |
| Cow position: | chr29:20465859-20466257 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 50 |
| Conread position: | 34-433 |
| Cow position: | chr29:408698-408287 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 35-357 |
| Cow position: | chr29:7749101-7748776 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 35-433 |
| Cow position: | chr29:2299749-2299341 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 35-436 |
| Cow position: | chr29:9963014-9963435 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 277 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 36-307 |
| Cow position: | chr29:9972818-9972552 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 36-440 |
| Cow position: | chr29:22284630-22285034 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 42-426 |
| Cow position: | chr29:3563839-3564229 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 59, 252 |
| Conread position: | 42-432 |
| Cow position: | chr29:3711604-3711992 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 44-310 |
| Cow position: | chr29:4880843-4881102 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 48-455 |
| Cow position: | chr29:7655811-7655411 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 50-431 |
| Cow position: | chr29:579306-578920 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 65-420 |
| Cow position: | chr29:30404563-30404211 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 66-432 |
| Cow position: | chr29:41184418-41184042 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 91-390 |
| Cow position: | chr29:9681602-9681298 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 253 |
| Conread position: | 134-442 |
| Cow position: | chr29:13612180-13611868 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 142-440 |
| Cow position: | chr29:24668200-24668498 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 219, 56 |
| Conread position: | 142-455 |
| Cow position: | chr29:32943858-32943533 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 140 |
| Conread position: | 144-433 |
| Cow position: | chr29:10453135-10452840 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 63 |
Show alignments to all cow chromosomes.