Cow genome map

Conread name: Pig2-41K08

Conread position: 1-425
Cow position: chr3:49998582-49999019 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 279
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 1-427
Cow position: chr3:68871305-68870867 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 276
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 11

Conread position: 1-431
Cow position: chr3:6713453-6713894 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 280
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr3:6784852-6785295 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 275
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr3:24264645-24265089 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 279
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 74

Conread position: 1-431
Cow position: chr3:34014786-34015229 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 279
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr3:40337695-40337256 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 277
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 11

Conread position: 1-431
Cow position: chr3:46858840-46858396 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 276
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr3:50203991-50204433 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 286
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr3:68718262-68717822 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 276
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 1-431
Cow position: chr3:68890127-68889685 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 283
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 11

Conread position: 1-432
Cow position: chr3:35619031-35619474 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 283
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr3:23009836-23010261 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 278
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr3:23287891-23287446 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 287
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr3:38869025-38869462 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 275
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr3:49542757-49542312 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 285
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr3:56337507-56337065 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 280
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 11

Conread position: 1-433
Cow position: chr3:66622660-66623102 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 282
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 14

Conread position: 1-433
Cow position: chr3:72632513-72632959 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 287
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 11

Conread position: 1-433
Cow position: chr3:78024988-78024541 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 291
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 11

Conread position: 1-436
Cow position: chr3:11510391-11509957 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 294
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 105, 26

Conread position: 1-440
Cow position: chr3:2708426-2707973 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 288
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 1-440
Cow position: chr3:74059921-74060370 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 287
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 11

Conread position: 1-444
Cow position: chr3:64653111-64653571 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 298
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 11

Conread position: 1-444
Cow position: chr3:68697523-68697063 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 284
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 11

Conread position: 1-445
Cow position: chr3:57741970-57742423 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 291
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 14

Conread position: 1-454
Cow position: chr3:26743427-26742957 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 293
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 11

Conread position: 2-317
Cow position: chr3:63256556-63256881 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 212
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 76

Conread position: 2-433
Cow position: chr3:596562-597006 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 283
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 75

Conread position: 2-433
Cow position: chr3:7477479-7477032 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 73

Conread position: 2-433
Cow position: chr3:10243099-10243550 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 290
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 33, 10

Conread position: 2-436
Cow position: chr3:78624784-78625218 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 9

Conread position: 3-433
Cow position: chr3:69434573-69434129 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 250
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 82

Conread position: 4-373
Cow position: chr3:22949005-22948627 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 15

Conread position: 4-433
Cow position: chr3:227417-226984 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 275
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 78

Conread position: 4-433
Cow position: chr3:18813953-18814395 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 284
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 74

Conread position: 5-262
Cow position: chr3:944126-944393 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 68

Conread position: 5-371
Cow position: chr3:19782145-19782507 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 56

Conread position: 5-392
Cow position: chr3:67628305-67627915 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 74

Conread position: 5-424
Cow position: chr3:8242063-8242491 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 43

Conread position: 5-430
Cow position: chr3:31320793-31321222 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 290
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 26

Conread position: 5-430
Cow position: chr3:62837515-62837083 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 285
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 11

Conread position: 5-431
Cow position: chr3:32620594-32620154 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 274
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 70

Conread position: 5-432
Cow position: chr3:26533541-26533107 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 285
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 30, 73

Conread position: 5-433
Cow position: chr3:70889726-70890153 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 279
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 109, 29

Conread position: 5-434
Cow position: chr3:79592587-79593035 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 287
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 224

Conread position: 5-437
Cow position: chr3:3653834-3653393 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 274
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 73

Conread position: 7-298
Cow position: chr3:38254193-38254474 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 68

Conread position: 8-284
Cow position: chr3:3525482-3525762 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 19

Conread position: 8-431
Cow position: chr3:35611608-35612041 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 273
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 99, 19

Conread position: 8-431
Cow position: chr3:48845460-48845893 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 275
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 19

Conread position: 9-413
Cow position: chr3:53647493-53647098 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 67

Conread position: 9-424
Cow position: chr3:51457442-51457852 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 268
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 206, 70

Conread position: 9-430
Cow position: chr3:15656825-15656397 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 277
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 67

Conread position: 9-430
Cow position: chr3:40297520-40297099 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 283
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 24, 17

Conread position: 12-363
Cow position: chr3:77062519-77062143 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 258

Conread position: 12-431
Cow position: chr3:34458412-34457979 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 271
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 63

Conread position: 12-431
Cow position: chr3:56485806-56485373 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 277
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 63

Conread position: 12-431
Cow position: chr3:83766707-83767140 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 267
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 63

Conread position: 12-432
Cow position: chr3:69421996-69421577 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 282
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 94, 18

Conread position: 12-434
Cow position: chr3:41208141-41207707 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 274
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 63

Conread position: 13-431
Cow position: chr3:22338364-22338795 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 268
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 40

Conread position: 13-436
Cow position: chr3:49563465-49563902 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 274
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 65

Conread position: 14-433
Cow position: chr3:29324613-29325031 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 280
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 49

Conread position: 15-431
Cow position: chr3:32413232-32412802 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 271
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 60

Conread position: 18-255
Cow position: chr3:58027695-58027458 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 14, 59

Conread position: 18-363
Cow position: chr3:19807250-19807582 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 54

Conread position: 21-418
Cow position: chr3:36000013-36000414 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 35

Conread position: 33-321
Cow position: chr3:56912340-56912630 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 37

Conread position: 33-431
Cow position: chr3:12664410-12664820 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 253
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 43

Conread position: 33-431
Cow position: chr3:15415943-15416353 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 258
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 40

Conread position: 33-431
Cow position: chr3:16225358-16225764 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 260
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 84, 40

Conread position: 33-431
Cow position: chr3:19798675-19798265 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 260
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 40

Conread position: 33-431
Cow position: chr3:47079136-47078727 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 263
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 40

Conread position: 33-431
Cow position: chr3:66888719-66888309 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 255
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 43

Conread position: 33-432
Cow position: chr3:49335681-49336086 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 262
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 6

Conread position: 33-432
Cow position: chr3:82931112-82931519 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 267
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 43

Conread position: 33-433
Cow position: chr3:9404747-9404344 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 267
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 9

Conread position: 33-434
Cow position: chr3:47696282-47696701 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 38

Conread position: 33-439
Cow position: chr3:18759943-18759523 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 273
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 43

Conread position: 34-431
Cow position: chr3:13466862-13466480 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 42

Conread position: 34-433
Cow position: chr3:13276798-13276392 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 267
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 36

Conread position: 34-433
Cow position: chr3:43190792-43190381 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 267
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 38

Conread position: 34-433
Cow position: chr3:75039367-75038953 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 38

Conread position: 35-433
Cow position: chr3:31770619-31771030 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 269
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 88

Conread position: 35-440
Cow position: chr3:24637890-24638307 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 260
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 47

Conread position: 36-439
Cow position: chr3:36171442-36171038 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 261
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 41

Conread position: 36-444
Cow position: chr3:11414300-11414716 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 261
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 41

Conread position: 38-356
Cow position: chr3:61249844-61250169 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 27

Conread position: 41-358
Cow position: chr3:57659680-57660009 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 174

Conread position: 41-433
Cow position: chr3:39556095-39555698 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 35

Conread position: 42-432
Cow position: chr3:36517155-36516754 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 259
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 30

Conread position: 43-444
Cow position: chr3:11363849-11363449 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 267
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 28

Conread position: 51-430
Cow position: chr3:61555187-61554795 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 51

Conread position: 82-324
Cow position: chr3:10037440-10037678 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 61

Conread position: 84-439
Cow position: chr3:7326962-7327331 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 215

Conread position: 90-434
Cow position: chr3:58855765-58856110 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 81

Conread position: 101-433
Cow position: chr3:4676847-4677193 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 249

Conread position: 105-430
Cow position: chr3:8453017-8452684 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 220

Conread position: 106-434
Cow position: chr3:38769353-38769684 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 140

Conread position: 192-434
Cow position: chr3:73637921-73638174 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 194-433
Cow position: chr3:62786396-62786153 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 146

Show alignments to all cow chromosomes.