Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-431 |
| Cow position: | chr4:18336697-18336265 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr4:33021377-33020940 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr4:44778944-44778501 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:3355712-3355267 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 1-433 |
| Cow position: | chr4:3449045-3449490 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:6266963-6266519 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:12238965-12238533 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:17539754-17539317 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:17876217-17876660 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:25597236-25596791 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:36898630-36899071 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr4:49744026-49744470 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 281 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 2-432 |
| Cow position: | chr4:60650838-60651286 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 288 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 2-433 |
| Cow position: | chr4:33070592-33070147 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 2-433 |
| Cow position: | chr4:33495807-33496255 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 219 |
| Conread position: | 5-415 |
| Cow position: | chr4:44067645-44067237 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 5-421 |
| Cow position: | chr4:45654914-45654492 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 5-433 |
| Cow position: | chr4:43897444-43897013 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 8-433 |
| Cow position: | chr4:17586875-17586439 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 92 |
| Conread position: | 9-357 |
| Cow position: | chr4:51606513-51606156 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 9-433 |
| Cow position: | chr4:43317391-43316955 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 9-434 |
| Cow position: | chr4:27350324-27350729 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 248, 10 |
| Conread position: | 9-440 |
| Cow position: | chr4:43028854-43028424 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 11-392 |
| Cow position: | chr4:68942333-68941941 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 12-431 |
| Cow position: | chr4:9356496-9356930 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 12-431 |
| Cow position: | chr4:13464071-13464505 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr4:45269153-45268720 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr4:47056168-47055734 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 12-431 |
| Cow position: | chr4:56014355-56013922 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-434 |
| Cow position: | chr4:30473692-30474129 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 17-448 |
| Cow position: | chr4:43834632-43835079 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 24-411 |
| Cow position: | chr4:15781814-15781405 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 33-254 |
| Cow position: | chr4:50603290-50603510 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 33-318 |
| Cow position: | chr4:35071567-35071859 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 33-405 |
| Cow position: | chr4:29033250-29033618 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 33-431 |
| Cow position: | chr4:605893-606303 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr4:29605191-29604782 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 33-433 |
| Cow position: | chr4:5611710-5611305 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 33-433 |
| Cow position: | chr4:28834849-28835256 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 33-433 |
| Cow position: | chr4:41977364-41976951 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 33-440 |
| Cow position: | chr4:51275145-51274715 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 34-431 |
| Cow position: | chr4:358167-358577 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr4:4378677-4379085 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr4:67382570-67382981 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 36-434 |
| Cow position: | chr4:43692907-43692487 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 37-431 |
| Cow position: | chr4:10122135-10121731 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 70, 36 |
| Conread position: | 40-440 |
| Cow position: | chr4:5913651-5914052 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 47-433 |
| Cow position: | chr4:29531160-29530763 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 48-440 |
| Cow position: | chr4:34176692-34176290 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 49-429 |
| Cow position: | chr4:34620624-34620242 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 50-428 |
| Cow position: | chr4:49825009-49825403 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 54-437 |
| Cow position: | chr4:40438216-40437828 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 56-431 |
| Cow position: | chr4:1188046-1187662 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 57-432 |
| Cow position: | chr4:55510531-55510141 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 62-433 |
| Cow position: | chr4:1936209-1935830 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 93-433 |
| Cow position: | chr4:1028884-1028526 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 319 |
| Conread position: | 95-427 |
| Cow position: | chr4:44686440-44686095 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 95-429 |
| Cow position: | chr4:52961350-52961011 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 101-430 |
| Cow position: | chr4:39933744-39934087 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 283 |
| Conread position: | 110-431 |
| Cow position: | chr4:63820628-63820953 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 162 |
Show alignments to all cow chromosomes.