Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-297 |
| Cow position: | chr7:23683039-23682742 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 1-331 |
| Cow position: | chr7:54547685-54547347 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-381 |
| Cow position: | chr7:54829943-54829548 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 1-431 |
| Cow position: | chr7:6626794-6626351 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr7:6722613-6723057 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr7:21424785-21424345 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr7:27099690-27099247 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr7:34818638-34819081 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 1-431 |
| Cow position: | chr7:65813418-65813861 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:3127885-3128329 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:13531325-13530881 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:21125090-21124645 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:34151527-34151966 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:34488496-34488931 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 1-433 |
| Cow position: | chr7:40317286-40317724 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:45946274-45945830 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:46748566-46749012 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr7:66907833-66908269 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 2-431 |
| Cow position: | chr7:1331836-1331391 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 2-432 |
| Cow position: | chr7:68445171-68445616 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 104, 69 |
| Conread position: | 3-298 |
| Cow position: | chr7:52802009-52801713 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 3-308 |
| Cow position: | chr7:39552758-39552447 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 4-432 |
| Cow position: | chr7:43240400-43239972 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 5-313 |
| Cow position: | chr7:34959285-34959600 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 5-433 |
| Cow position: | chr7:11420997-11420556 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 5-433 |
| Cow position: | chr7:47191158-47190716 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 6-433 |
| Cow position: | chr7:20828615-20829049 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 7-431 |
| Cow position: | chr7:50880661-50881089 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 8-431 |
| Cow position: | chr7:1442245-1441813 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 8-431 |
| Cow position: | chr7:37165453-37165885 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 9-323 |
| Cow position: | chr7:16019428-16019737 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 134, 14 |
| Conread position: | 9-352 |
| Cow position: | chr7:34211749-34212085 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 9-391 |
| Cow position: | chr7:59458309-59458689 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 9-425 |
| Cow position: | chr7:14916785-14916359 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 9-433 |
| Cow position: | chr7:5305400-5304961 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 9-434 |
| Cow position: | chr7:14136263-14135824 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 9-434 |
| Cow position: | chr7:19882887-19882462 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 12-395 |
| Cow position: | chr7:64001979-64001608 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 107, 7 |
| Conread position: | 12-431 |
| Cow position: | chr7:18865248-18864815 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 12-433 |
| Cow position: | chr7:45170129-45170560 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 13-423 |
| Cow position: | chr7:6917332-6916930 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 15-361 |
| Cow position: | chr7:59686582-59686934 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 15-433 |
| Cow position: | chr7:48813717-48814144 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 18-393 |
| Cow position: | chr7:32186140-32185775 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 18-433 |
| Cow position: | chr7:18855769-18856192 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 19-432 |
| Cow position: | chr7:54853969-54854386 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 20-434 |
| Cow position: | chr7:16967432-16967008 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 22-438 |
| Cow position: | chr7:99960-99533 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 51 |
| Conread position: | 24-433 |
| Cow position: | chr7:51193322-51193733 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 30-434 |
| Cow position: | chr7:59085547-59085950 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 33-257 |
| Cow position: | chr7:20368505-20368279 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 33-298 |
| Cow position: | chr7:49403940-49403674 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 33-349 |
| Cow position: | chr7:6930005-6929688 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 33-429 |
| Cow position: | chr7:1616775-1616385 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 30, 132 |
| Conread position: | 33-431 |
| Cow position: | chr7:113230-113639 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr7:21322877-21323285 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-431 |
| Cow position: | chr7:46265777-46266187 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-433 |
| Cow position: | chr7:19168862-19168449 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 33-433 |
| Cow position: | chr7:57025441-57025039 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 33-438 |
| Cow position: | chr7:26021420-26021828 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 33-444 |
| Cow position: | chr7:62951957-62952385 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 34-255 |
| Cow position: | chr7:13779505-13779722 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 38 |
| Conread position: | 34-433 |
| Cow position: | chr7:195284-194879 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 34-433 |
| Cow position: | chr7:443644-443235 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr7:1368081-1367670 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr7:10428807-10428395 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 34-434 |
| Cow position: | chr7:29744921-29744523 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 34-440 |
| Cow position: | chr7:38399467-38399885 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 35-433 |
| Cow position: | chr7:61624059-61623667 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 300, 41 |
| Conread position: | 35-450 |
| Cow position: | chr7:58441174-58441599 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 36-317 |
| Cow position: | chr7:1596383-1596101 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 36-424 |
| Cow position: | chr7:18935058-18934669 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 36-440 |
| Cow position: | chr7:1010391-1010000 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 48-433 |
| Cow position: | chr7:19272927-19272533 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 49-430 |
| Cow position: | chr7:11738380-11738776 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 52-336 |
| Cow position: | chr7:22967050-22966769 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 59-361 |
| Cow position: | chr7:59118546-59118853 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 59-433 |
| Cow position: | chr7:55689333-55688952 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 334 |
| Conread position: | 82-434 |
| Cow position: | chr7:13820992-13821350 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 93-391 |
| Cow position: | chr7:20805283-20805587 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 182-427 |
| Cow position: | chr7:9858166-9857920 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 190-427 |
| Cow position: | chr7:22184966-22184721 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 195 |
Show alignments to all cow chromosomes.