Cow genome map
| Conread name: | Pig2-41K08 |
| Conread position: | 1-253 |
| Cow position: | chr9:31418086-31417828 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-431 |
| Cow position: | chr9:34240682-34240239 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr9:9015492-9015936 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr9:10856440-10856882 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr9:18507409-18506962 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 1-433 |
| Cow position: | chr9:18539081-18539525 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 1-433 |
| Cow position: | chr9:21411727-21412174 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr9:27037529-27037970 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-433 |
| Cow position: | chr9:32971795-32972229 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-434 |
| Cow position: | chr9:2526707-2527151 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-440 |
| Cow position: | chr9:56302022-56301571 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1-472 |
| Cow position: | chr9:3311036-3311520 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 4-431 |
| Cow position: | chr9:3061011-3061451 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 4-431 |
| Cow position: | chr9:26280271-26280705 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 4-433 |
| Cow position: | chr9:30674490-30674937 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 288 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 5-270 |
| Cow position: | chr9:9680200-9679935 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 5-375 |
| Cow position: | chr9:32292469-32292830 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 5-423 |
| Cow position: | chr9:27487450-27487039 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 5-425 |
| Cow position: | chr9:34946601-34946168 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 5-431 |
| Cow position: | chr9:35747450-35747024 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 5-433 |
| Cow position: | chr9:3960722-3960305 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 5-440 |
| Cow position: | chr9:649629-649180 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 9-433 |
| Cow position: | chr9:3757407-3756969 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 10-392 |
| Cow position: | chr9:49754962-49754576 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 46, 170 |
| Conread position: | 11-431 |
| Cow position: | chr9:62734714-62734296 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 12-431 |
| Cow position: | chr9:999892-1000325 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 12-431 |
| Cow position: | chr9:35544101-35543668 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 33-284 |
| Cow position: | chr9:30490028-30490288 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 33-285 |
| Cow position: | chr9:50775293-50775553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 33-431 |
| Cow position: | chr9:26277108-26277514 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 33-432 |
| Cow position: | chr9:5516645-5517050 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 33-433 |
| Cow position: | chr9:1515746-1516141 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 33-433 |
| Cow position: | chr9:19078108-19078506 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 33-440 |
| Cow position: | chr9:10644188-10643769 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 33-440 |
| Cow position: | chr9:14344857-14344449 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr9:1992084-1991673 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr9:5627270-5627681 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 34-433 |
| Cow position: | chr9:31810030-31810440 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 35-431 |
| Cow position: | chr9:59430967-59431368 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 36-433 |
| Cow position: | chr9:59508714-59508311 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 40-431 |
| Cow position: | chr9:4941037-4940638 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 42-431 |
| Cow position: | chr9:4306608-4306209 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 43-427 |
| Cow position: | chr9:24723242-24723624 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 84 |
| Conread position: | 44-433 |
| Cow position: | chr9:26054509-26054908 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 46-433 |
| Cow position: | chr9:52002614-52002233 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 56-433 |
| Cow position: | chr9:2872949-2873336 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 80-433 |
| Cow position: | chr9:8097652-8098019 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 106-392 |
| Cow position: | chr9:16012377-16012089 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 142-434 |
| Cow position: | chr9:48797652-48797364 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 78 |
Show alignments to all cow chromosomes.