Cow genome map
| Conread name: | Pig2-44F14 |
| Conread position: | 1-144 |
| Cow position: | chrX:16809659-16809517 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-163 |
| Cow position: | chrX:16804914-16804753 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-163 |
| Cow position: | chrX:20034181-20034020 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-213 |
| Cow position: | chrX:2273528-2273748 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 157, 47 |
| Conread position: | 1-239 |
| Cow position: | chrX:36838945-36839194 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 1-239 |
| Cow position: | chrX:45417374-45417130 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 160, 45 |
| Conread position: | 1-240 |
| Cow position: | chrX:30013220-30013468 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-241 |
| Cow position: | chrX:24412253-24412501 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 1-241 |
| Cow position: | chrX:28648617-28648389 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 180, 42 |
| Conread position: | 1-241 |
| Cow position: | chrX:28754112-28753863 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-243 |
| Cow position: | chrX:2500875-2501126 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 147, 47 |
| Conread position: | 1-244 |
| Cow position: | chrX:5281554-5281306 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 159, 47 |
| Conread position: | 1-244 |
| Cow position: | chrX:10867626-10867375 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:5333203-5332952 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:13072221-13071966 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:13092781-13092526 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:13243883-13244138 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:18657576-18657325 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 159, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:19474923-19474669 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:20357775-20357520 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-247 |
| Cow position: | chrX:36536505-36536250 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:2047316-2047567 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:2486881-2487134 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 153, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:3360055-3360304 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:3418993-3418735 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 153, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:4766935-4767179 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 161, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:5366770-5366516 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 155, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:5865366-5865626 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 159, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:9127310-9127567 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:12359115-12359372 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:16045196-16045453 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:17053785-17054052 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 82, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:17890771-17891024 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 45 |
| Conread position: | 1-249 |
| Cow position: | chrX:20741402-20741146 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:22565460-22565203 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 153, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:29171556-29171299 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:30167850-30167592 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:31340440-31340182 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 1-249 |
| Cow position: | chrX:35532084-35532338 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 47 |
| Conread position: | 1-249 |
| Cow position: | chrX:35887318-35887573 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 45 |
| Conread position: | 1-250 |
| Cow position: | chrX:21766857-21767115 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 1-250 |
| Cow position: | chrX:29095090-29094832 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 2-163 |
| Cow position: | chrX:13431943-13431786 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 2-249 |
| Cow position: | chrX:12667103-12666847 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 46 |
Show alignments to all cow chromosomes.