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Cow genome map

           
Conread name:
           
Pig2-45C03
        

               
Conread position:
               
1-122
               

               
Cow position:
               
chr13:20465047-20465168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr13:27835802-27835943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 106
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr13:37980150-37980315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr13:24237660-24237835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr13:46459190-46459016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:47547210-47547391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:4262448-4262261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:4264538-4264351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:27326132-27326320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:59170091-59169904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:2414559-2414370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:13261548-13261361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:19393788-19393599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:34112853-34112666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
122, 106
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:46182306-46182119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:57769490-57769679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:60508589-60508777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr13:3650850-3650660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:54418942-54418753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 106
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:14399619-14399401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 172
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr13:45072890-45073149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr13:54237860-54237608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
189, 75
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:12978089-12977821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:19882513-19882777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
187, 22
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:20571261-20570985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:26073466-26073191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:31580280-31580551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:34728311-34728578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
189, 106
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr13:1459004-1458742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
122, 105
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr13:48627991-48628266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr13:15167352-15167075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr13:9803598-9803315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 106
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:19178816-19178530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:22774767-22775043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:22780522-22780246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:34345758-34346036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:38283445-38283727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:58742595-58742877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr13:1155173-1155452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr13:15446581-15446302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr13:40989617-40989334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:609311-609587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:9301840-9302120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:9537693-9537970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:13222857-13222577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:15622388-15622114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
187, 113
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:19022780-19022502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 106
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:20563524-20563253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:25453699-25453425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:26098677-26098397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:31814394-31814122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
189, 106
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:32017021-32017268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:32825878-32826152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:34941124-34941402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:43974502-43974222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 174
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:44323513-44323234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
123, 107
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:47318100-47317820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:47590607-47590886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:48378057-48378317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:560932-560649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:1590698-1590414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
129, 175
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:1636868-1637151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:2465898-2466182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 175
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:3143760-3143490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
189, 83
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:3163036-3162749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:3822634-3822350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:3970095-3970378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:4487309-4487590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:4944846-4945138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:5498349-5498066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:6664672-6664389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:7402861-7403144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:7465641-7465358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:9049055-9049321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:11821854-11821568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:13330002-13330284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
121, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:14590057-14589774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:15280744-15281027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:15538530-15538248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:15921004-15920726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:17567457-17567736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:17800608-17800324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:18121416-18121135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:18329669-18329386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:19565252-19564969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:19638894-19639175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 168
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:20377798-20378089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:20538115-20537835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:20561632-20561351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:21836841-21836567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:22117139-22116855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:24156405-24156121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:28413836-28413549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:30306870-30307153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:30504991-30504708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:30651708-30651427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:31607982-31607700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:31809045-31808764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:32754705-32754988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 214
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:32793886-32793601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:32980785-32980502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:33907284-33907015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
214, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:34282218-34281932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:35540857-35541140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:36937175-36937444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:37945689-37945968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:41807285-41807027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:42086677-42086396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:42114551-42114273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
94, 263
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:42215663-42215379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:42277052-42277329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:46055702-46055419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 107
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:47023243-47022960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:49805501-49805220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:49977126-49977409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:50440372-50440089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:51298032-51297749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:51902151-51901864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
118, 105
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:52010057-52010334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
188, 47
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:54286241-54286519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
189, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:55371626-55371909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:57493649-57493932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 106
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:61954695-61954978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:4420845-4420561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:9570549-9570268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:11767435-11767722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:14302531-14302247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
92, 173
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:17820728-17821009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:20175273-20174990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:21126549-21126825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:21988574-21988855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:30468662-30468379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:32550200-32550481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:32733735-32733451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:33466876-33467160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:33522500-33522221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:33876189-33875913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
184, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:34038101-34037817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:34262848-34263130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:37520815-37521099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:37978655-37978941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:45353556-45353293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:48164943-48165224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:60646129-60645847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:61976432-61976714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:2800340-2800625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 106
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:19262312-19262059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
118, 105
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:24370939-24370650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:34375789-34375505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:47215712-47216007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:31757146-31756868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:35761027-35761325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:46465762-46465465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
123, 275
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:12389922-12389624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:15869658-15869352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:21235155-21235452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 107
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr13:46324256-46324555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 107
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr13:32319676-32319370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr13:60967325-60967008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr13:5229100-5228914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 105
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr13:32221425-32221237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 105
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr13:22085226-22085498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr13:2955309-2955586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr13:2557977-2558258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr13:51941267-51940980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr13:1011865-1011587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr13:20440067-20440346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr13:52585491-52585768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr13:16808040-16808321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 104
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr13:34332982-34333099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr13:21764801-21765092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr13:1346705-1346426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 103
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr13:30794344-30794073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
180, 101
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr13:7365915-7366212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
118, 101
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr13:58718976-58719277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr13:22790444-22790166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
117, 100
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr13:34994404-34994715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr13:33332877-33332605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
116, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr13:33500209-33499934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr13:9002272-9002000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr13:25434601-25434877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
14-263
               

               
Cow position:
               
chr13:8961100-8960836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:13177363-13177193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
16-265
               

               
Cow position:
               
chr13:49514215-49514480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr13:19426179-19426446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr13:60447574-60447841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
17-306
               

               
Cow position:
               
chr13:40722165-40722471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
18-178
               

               
Cow position:
               
chr13:60450087-60449926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
18-268
               

               
Cow position:
               
chr13:14716818-14717085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr13:27027261-27027521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
20-269
               

               
Cow position:
               
chr13:50284719-50284454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr13:5261836-5262094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
23-260
               

               
Cow position:
               
chr13:18908547-18908297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
23-268
               

               
Cow position:
               
chr13:8636091-8635832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
153, 145
               

               
Conread position:
               
23-268
               

               
Cow position:
               
chr13:15537005-15536745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 84
               

               
Conread position:
               
24-285
               

               
Cow position:
               
chr13:23586680-23586394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
25-262
               

               
Cow position:
               
chr13:20088046-20088290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr13:18533923-18534183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
99, 82
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr13:311941-311684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 80
               

               
Conread position:
               
28-268
               

               
Cow position:
               
chr13:20665881-20666136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
28-299
               

               
Cow position:
               
chr13:23856745-23856459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
29-188
               

               
Cow position:
               
chr13:11202723-11202568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
29-296
               

               
Cow position:
               
chr13:50681255-50681536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
30-279
               

               
Cow position:
               
chr13:43762669-43762413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
159, 78
               

               
Conread position:
               
30-300
               

               
Cow position:
               
chr13:8195613-8195328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
31-268
               

               
Cow position:
               
chr13:15872953-15872701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr13:9587101-9587265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
35-265
               

               
Cow position:
               
chr13:5278471-5278718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
35-268
               

               
Cow position:
               
chr13:12407783-12408032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
44-268
               

               
Cow position:
               
chr13:12044849-12045089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
48-293
               

               
Cow position:
               
chr13:21210415-21210157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
48-306
               

               
Cow position:
               
chr13:34052109-34052390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
55-267
               

               
Cow position:
               
chr13:51527966-51528193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr13:25413157-25412933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
58-268
               

               
Cow position:
               
chr13:16092283-16092058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chr13:24099510-24099732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
60-280
               

               
Cow position:
               
chr13:48038602-48038366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
61-188
               

               
Cow position:
               
chr13:20805362-20805233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
71-263
               

               
Cow position:
               
chr13:37516675-37516877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
71-268
               

               
Cow position:
               
chr13:5621869-5621656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
77-299
               

               
Cow position:
               
chr13:9108064-9107831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
78-270
               

               
Cow position:
               
chr13:7662975-7663179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
84-268
               

               
Cow position:
               
chr13:58044080-58043880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
85-269
               

               
Cow position:
               
chr13:47313348-47313154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
88-263
               

               
Cow position:
               
chr13:36770974-36771165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
109-268
               

               
Cow position:
               
chr13:8202463-8202633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
209-303
               

               
Cow position:
               
chr13:46458947-46458852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               
Show alignments to all cow chromosomes.