Cow genome map
| Conread name: | Pig2-70I19 |
| Conread position: | 1-201 |
| Cow position: | chr11:21902525-21902330 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 48 |
| Conread position: | 1-210 |
| Cow position: | chr11:27669763-27669561 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 1-251 |
| Cow position: | chr11:64081513-64081267 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 1-253 |
| Cow position: | chr11:50027306-50027057 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 214, 74 |
| Conread position: | 1-263 |
| Cow position: | chr11:84390114-84390367 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 161, 74 |
| Conread position: | 1-336 |
| Cow position: | chr11:7117019-7117357 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 161, 74 |
| Conread position: | 1-360 |
| Cow position: | chr11:28054042-28053684 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 74 |
| Conread position: | 1-403 |
| Cow position: | chr11:36763319-36763723 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 1-430 |
| Cow position: | chr11:9168942-9168532 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1-441 |
| Cow position: | chr11:3855798-3856230 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 1-441 |
| Cow position: | chr11:28108706-28109156 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 1-457 |
| Cow position: | chr11:31926739-31927191 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 309 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 2-204 |
| Cow position: | chr11:3252289-3252093 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 2-411 |
| Cow position: | chr11:49840426-49840841 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 72 |
| Conread position: | 2-441 |
| Cow position: | chr11:53681984-53682427 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 300 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 134, 73 |
| Conread position: | 2-515 |
| Cow position: | chr11:49559099-49558586 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 20 |
| Conread position: | 4-376 |
| Cow position: | chr11:54484841-54484467 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 89 |
| Conread position: | 4-441 |
| Cow position: | chr11:26548083-26548543 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 71 |
| Conread position: | 4-441 |
| Cow position: | chr11:75554407-75553981 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 4-442 |
| Cow position: | chr11:80473695-80473261 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 294 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 4-445 |
| Cow position: | chr11:19101923-19101471 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 71 |
| Conread position: | 5-283 |
| Cow position: | chr11:49409299-49409565 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 5-411 |
| Cow position: | chr11:31861474-31861888 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 6-369 |
| Cow position: | chr11:23127323-23126964 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 69 |
| Conread position: | 6-506 |
| Cow position: | chr11:26564511-26564013 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 6-532 |
| Cow position: | chr11:85393240-85392710 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 69 |
| Conread position: | 7-286 |
| Cow position: | chr11:18070618-18070351 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 7-286 |
| Cow position: | chr11:21930442-21930170 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 161, 60 |
| Conread position: | 7-320 |
| Cow position: | chr11:10216764-10216461 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 11-445 |
| Cow position: | chr11:72310455-72310012 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 79 |
| Conread position: | 15-490 |
| Cow position: | chr11:1489563-1489102 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 148, 75 |
| Conread position: | 16-423 |
| Cow position: | chr11:15898406-15897994 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 59 |
| Conread position: | 16-457 |
| Cow position: | chr11:4063283-4062848 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 74 |
| Conread position: | 19-439 |
| Cow position: | chr11:10882904-10883321 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 294, 56 |
| Conread position: | 47-441 |
| Cow position: | chr11:49553560-49553160 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 62-447 |
| Cow position: | chr11:39804369-39804751 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 124, 13 |
| Conread position: | 73-376 |
| Cow position: | chr11:12160003-12159696 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 141, 85 |
| Conread position: | 73-441 |
| Cow position: | chr11:42311804-42311422 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 159 |
| Conread position: | 90-339 |
| Cow position: | chr11:23479200-23479451 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 210, 127 |
| Conread position: | 90-434 |
| Cow position: | chr11:37357944-37358308 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 142, 127 |
| Conread position: | 93-448 |
| Cow position: | chr11:31539794-31540152 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 162, 8 |
| Conread position: | 95-343 |
| Cow position: | chr11:13065304-13065056 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 185, 120 |
| Conread position: | 105-419 |
| Cow position: | chr11:81852038-81851721 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 105-496 |
| Cow position: | chr11:9224877-9224475 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 119-452 |
| Cow position: | chr11:21890293-21889963 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 135-441 |
| Cow position: | chr11:19071513-19071203 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 140-374 |
| Cow position: | chr11:77472821-77473061 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 86 |
Show alignments to all cow chromosomes.