Cow genome map
| Conread name: | Pig2-70I19 |
| Conread position: | 1-237 |
| Cow position: | chr3:68346347-68346118 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 1-254 |
| Cow position: | chr3:31420121-31420373 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 1-345 |
| Cow position: | chr3:63915331-63914983 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 1-433 |
| Cow position: | chr3:29579410-29579846 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 50 |
| Conread position: | 1-441 |
| Cow position: | chr3:6877387-6876944 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 62 |
| Conread position: | 1-441 |
| Cow position: | chr3:40342904-40343356 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 1-441 |
| Cow position: | chr3:47177488-47177038 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 74 |
| Conread position: | 1-441 |
| Cow position: | chr3:57753580-57754030 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 74 |
| Conread position: | 1-452 |
| Cow position: | chr3:43306163-43305728 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 1-452 |
| Cow position: | chr3:64822883-64823345 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 233 |
| Conread position: | 1-463 |
| Cow position: | chr3:22853704-22853253 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 1-495 |
| Cow position: | chr3:56397973-56398458 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 74 |
| Conread position: | 2-201 |
| Cow position: | chr3:53411953-53412150 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 2-432 |
| Cow position: | chr3:63200398-63200823 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 11 |
| Conread position: | 2-498 |
| Cow position: | chr3:10095215-10095708 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 330 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 2-542 |
| Cow position: | chr3:4666887-4667439 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 360 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 3-453 |
| Cow position: | chr3:82637898-82638340 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 10 |
| Conread position: | 4-435 |
| Cow position: | chr3:64357007-64356574 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 71 |
| Conread position: | 4-441 |
| Cow position: | chr3:24458377-24457956 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 96 |
| Conread position: | 4-441 |
| Cow position: | chr3:77424422-77424845 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 4-442 |
| Cow position: | chr3:37989673-37990119 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 4-442 |
| Cow position: | chr3:46503334-46503789 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 71 |
| Conread position: | 4-540 |
| Cow position: | chr3:10240444-10240998 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 71 |
| Conread position: | 5-450 |
| Cow position: | chr3:15181154-15181592 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 62 |
| Conread position: | 7-182 |
| Cow position: | chr3:45773615-45773443 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 7-501 |
| Cow position: | chr3:37625788-37626268 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 7-515 |
| Cow position: | chr3:42994882-42994377 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 224 |
| Conread position: | 9-428 |
| Cow position: | chr3:54771660-54772060 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 304, 73 |
| Conread position: | 9-441 |
| Cow position: | chr3:64651421-64651867 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 186 |
| Conread position: | 10-503 |
| Cow position: | chr3:79314721-79315221 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 14-442 |
| Cow position: | chr3:70887935-70888369 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 15-400 |
| Cow position: | chr3:32612630-32612253 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 287 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 15-441 |
| Cow position: | chr3:24644034-24644454 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 15-487 |
| Cow position: | chr3:49271315-49270840 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 18-441 |
| Cow position: | chr3:34506546-34506113 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 57 |
| Conread position: | 32-411 |
| Cow position: | chr3:27301764-27301369 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 47-441 |
| Cow position: | chr3:52653816-52653420 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 63-441 |
| Cow position: | chr3:67164131-67164517 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 90-441 |
| Cow position: | chr3:64016508-64016136 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 98-486 |
| Cow position: | chr3:18942923-18943301 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 124 |
| Conread position: | 140-435 |
| Cow position: | chr3:83232213-83231911 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 192-441 |
| Cow position: | chr3:56635563-56635821 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 287-500 |
| Cow position: | chr3:42720625-42720406 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 96 |
Show alignments to all cow chromosomes.