Cow genome map
| Conread name: | Pig2-70I19 |
| Conread position: | 1-156 |
| Cow position: | chr6:6157372-6157521 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 23 |
| Conread position: | 1-215 |
| Cow position: | chr6:56042892-56042679 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 98, 68 |
| Conread position: | 1-281 |
| Cow position: | chr6:46573780-46573504 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 1-286 |
| Cow position: | chr6:1099330-1099056 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 182, 74 |
| Conread position: | 1-301 |
| Cow position: | chr6:44550328-44550034 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 247, 16 |
| Conread position: | 1-416 |
| Cow position: | chr6:34443739-34444171 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 1-423 |
| Cow position: | chr6:64282233-64281810 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 270, 63 |
| Conread position: | 1-441 |
| Cow position: | chr6:18973581-18973141 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 89 |
| Conread position: | 1-441 |
| Cow position: | chr6:58065557-58066007 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 170 |
| Conread position: | 1-442 |
| Cow position: | chr6:17244573-17244135 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 1-452 |
| Cow position: | chr6:60931518-60931972 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 1-491 |
| Cow position: | chr6:50646357-50645858 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 1-492 |
| Cow position: | chr6:28133757-28134237 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 74 |
| Conread position: | 1-500 |
| Cow position: | chr6:15926758-15926226 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 2-247 |
| Cow position: | chr6:65940994-65940755 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 161, 88 |
| Conread position: | 2-344 |
| Cow position: | chr6:15892686-15892352 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 282, 73 |
| Conread position: | 2-376 |
| Cow position: | chr6:28087996-28087631 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 207, 43 |
| Conread position: | 2-440 |
| Cow position: | chr6:538816-539237 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 78 |
| Conread position: | 2-441 |
| Cow position: | chr6:15920682-15921127 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 2-490 |
| Cow position: | chr6:19336917-19336431 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 86 |
| Conread position: | 4-386 |
| Cow position: | chr6:12530320-12530675 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 260, 37 |
| Conread position: | 4-418 |
| Cow position: | chr6:8203013-8203428 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 86 |
| Conread position: | 4-441 |
| Cow position: | chr6:15278981-15278542 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 71 |
| Conread position: | 4-441 |
| Cow position: | chr6:28105031-28104584 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 4-441 |
| Cow position: | chr6:40866487-40866047 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 71 |
| Conread position: | 4-540 |
| Cow position: | chr6:39334039-39333485 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 71 |
| Conread position: | 5-210 |
| Cow position: | chr6:33991567-33991369 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 5-418 |
| Cow position: | chr6:24239889-24240303 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 70 |
| Conread position: | 6-418 |
| Cow position: | chr6:51715369-51715776 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 69 |
| Conread position: | 8-441 |
| Cow position: | chr6:51730931-51731358 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 67 |
| Conread position: | 9-324 |
| Cow position: | chr6:44032627-44032940 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 154, 66 |
| Conread position: | 9-493 |
| Cow position: | chr6:13310525-13310029 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 10-441 |
| Cow position: | chr6:66193684-66193247 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 210, 65 |
| Conread position: | 11-448 |
| Cow position: | chr6:44262654-44262186 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 13-389 |
| Cow position: | chr6:7834360-7834733 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 46 |
| Conread position: | 15-289 |
| Cow position: | chr6:44905329-44905592 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 26-441 |
| Cow position: | chr6:31636562-31636154 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 73-441 |
| Cow position: | chr6:10632452-10632821 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 112-452 |
| Cow position: | chr6:41228379-41228729 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 143-442 |
| Cow position: | chr6:27332963-27333269 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 22 |
| Conread position: | 272-442 |
| Cow position: | chr6:2577040-2577215 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.