Cow genome map

Conread name: Pig2-70I19

Conread position: 1-377
Cow position: chrX:16015775-16015381 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 268
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 155, 89

Conread position: 1-399
Cow position: chrX:13416771-13416365 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 74

Conread position: 1-441
Cow position: chrX:3375243-3374799 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 74

Conread position: 1-441
Cow position: chrX:26426903-26426470 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 74

Conread position: 1-441
Cow position: chrX:29286092-29286541 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 72

Conread position: 1-452
Cow position: chrX:24134595-24134137 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 74

Conread position: 1-468
Cow position: chrX:28554273-28554748 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 327
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 252, 89

Conread position: 1-494
Cow position: chrX:21269398-21268874 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 352
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 163, 74

Conread position: 1-521
Cow position: chrX:6198444-6197951 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 334
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 95, 46

Conread position: 1-543
Cow position: chrX:30070403-30070938 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 361
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 314, 63

Conread position: 1-553
Cow position: chrX:9126022-9126584 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 89

Conread position: 2-281
Cow position: chrX:18767837-18768109 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 2-281
Cow position: chrX:25612722-25612988 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 2-375
Cow position: chrX:17491299-17490931 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 218, 73

Conread position: 2-377
Cow position: chrX:27344781-27344429 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 264, 68

Conread position: 2-392
Cow position: chrX:21580129-21580526 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 2-441
Cow position: chrX:15309265-15308828 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 299
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 15, 66

Conread position: 2-445
Cow position: chrX:44752548-44752101 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 292
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 88

Conread position: 2-452
Cow position: chrX:18553094-18553550 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 5

Conread position: 3-441
Cow position: chrX:41102801-41102365 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 72

Conread position: 4-440
Cow position: chrX:33707104-33707517 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 33

Conread position: 4-441
Cow position: chrX:10384993-10385409 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 270, 46

Conread position: 4-441
Cow position: chrX:23455351-23454908 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 71

Conread position: 4-441
Cow position: chrX:26578339-26578778 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 293
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 92, 67

Conread position: 4-442
Cow position: chrX:13082342-13081902 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 298
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 87, 71

Conread position: 4-462
Cow position: chrX:17613357-17612894 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 59

Conread position: 4-521
Cow position: chrX:21830197-21830724 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 19

Conread position: 5-344
Cow position: chrX:29996532-29996201 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 244, 67

Conread position: 5-417
Cow position: chrX:5296882-5296460 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 70

Conread position: 5-441
Cow position: chrX:21589634-21590098 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 70

Conread position: 5-495
Cow position: chrX:4411327-4411800 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 21

Conread position: 6-441
Cow position: chrX:1547641-1548090 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 69

Conread position: 6-532
Cow position: chrX:26528643-26529184 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 69

Conread position: 7-452
Cow position: chrX:13182447-13182012 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 68

Conread position: 9-441
Cow position: chrX:30011669-30012111 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 154, 66

Conread position: 10-419
Cow position: chrX:2012025-2011623 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 65

Conread position: 10-441
Cow position: chrX:29778840-29778401 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 68

Conread position: 10-491
Cow position: chrX:11492372-11492866 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 307
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 61

Conread position: 11-154
Cow position: chrX:19875064-19875205 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 14

Conread position: 14-441
Cow position: chrX:23132650-23133077 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 76

Conread position: 20-440
Cow position: chrX:321147-321567 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 55

Conread position: 23-441
Cow position: chrX:30366097-30365682 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 52

Conread position: 29-336
Cow position: chrX:21276220-21275916 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 250, 46

Conread position: 42-446
Cow position: chrX:29944480-29944870 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 262
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 34

Conread position: 72-441
Cow position: chrX:10416727-10416344 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 162

Conread position: 77-441
Cow position: chrX:8574742-8574384 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 101-441
Cow position: chrX:35940489-35940158 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 126

Conread position: 105-423
Cow position: chrX:45377341-45377015 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 58, 229

Conread position: 105-447
Cow position: chrX:17667018-17666674 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 21

Show alignments to all cow chromosomes.