Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig2-73K09
        

               Conread position:
               1-114
               

               Cow position:
               chr11:2900744-2900630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr11:35684524-35684396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               96, 125
               

               Conread position:
               1-129
               

               Cow position:
               chr11:67747261-67747385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr11:62168354-62168224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-132
               

               Cow position:
               chr11:17831244-17831114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               97, 28
               

               Conread position:
               1-132
               

               Cow position:
               chr11:22747351-22747222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               1-132
               

               Cow position:
               chr11:48248239-48248105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-132
               

               Cow position:
               chr11:69075888-69076019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               1-151
               

               Cow position:
               chr11:72884617-72884466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               1-160
               

               Cow position:
               chr11:35536564-35536729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               1-160
               

               Cow position:
               chr11:80616220-80616369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               1-166
               

               Cow position:
               chr11:49152926-49153091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               1-167
               

               Cow position:
               chr11:49934754-49934591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               1-168
               

               Cow position:
               chr11:21885810-21885986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               1-169
               

               Cow position:
               chr11:50152837-50152659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr11:9698879-9699045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               1-172
               

               Cow position:
               chr11:62812973-62812795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               151
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr11:8684103-8683920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-174
               

               Cow position:
               chr11:41603709-41603542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               95, 88
               

               Conread position:
               1-174
               

               Cow position:
               chr11:55744444-55744628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr11:27449634-27449470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               1-177
               

               Cow position:
               chr11:73354083-73353905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr11:17676396-17676211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr11:21852325-21852145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr11:30172286-30172470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               97, 22
               

               Conread position:
               1-186
               

               Cow position:
               chr11:40608617-40608422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 48
               

               Conread position:
               1-186
               

               Cow position:
               chr11:43914268-43914464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr11:47724875-47725060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               1-194
               

               Cow position:
               chr11:39115472-39115655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               170, 48
               

               Conread position:
               2-178
               

               Cow position:
               chr11:6194383-6194552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               3-98
               

               Cow position:
               chr11:69392541-69392636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-110
               

               Cow position:
               chr11:31352573-31352465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-113
               

               Cow position:
               chr11:249503-249392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-114
               

               Cow position:
               chr11:35874024-35873912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-114
               

               Cow position:
               chr11:53553197-53553306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-117
               

               Cow position:
               chr11:64406207-64406322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-119
               

               Cow position:
               chr11:16843005-16842892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               3-119
               

               Cow position:
               chr11:22499385-22499271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               3-120
               

               Cow position:
               chr11:29946935-29946817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-123
               

               Cow position:
               chr11:43898118-43898238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               3-124
               

               Cow position:
               chr11:17278693-17278575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 29
               

               Conread position:
               3-124
               

               Cow position:
               chr11:32690992-32690870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-126
               

               Cow position:
               chr11:64090118-64089995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 104
               

               Conread position:
               3-127
               

               Cow position:
               chr11:15373817-15373943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-127
               

               Cow position:
               chr11:53717828-53717703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-127
               

               Cow position:
               chr11:63909685-63909563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 46
               

               Conread position:
               3-127
               

               Cow position:
               chr11:71492881-71492758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               3-128
               

               Cow position:
               chr11:23128561-23128435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-129
               

               Cow position:
               chr11:377663-377537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 119
               

               Conread position:
               3-129
               

               Cow position:
               chr11:3234054-3234181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-129
               

               Cow position:
               chr11:5201673-5201547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               95, 109
               

               Conread position:
               3-129
               

               Cow position:
               chr11:17321626-17321754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 58
               

               Conread position:
               3-129
               

               Cow position:
               chr11:20761826-20761948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               3-129
               

               Cow position:
               chr11:44234334-44234461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-129
               

               Cow position:
               chr11:62376494-62376368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               95, 61
               

               Conread position:
               3-129
               

               Cow position:
               chr11:83230421-83230295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               3-130
               

               Cow position:
               chr11:48474682-48474810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-130
               

               Cow position:
               chr11:58173604-58173731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               3-130
               

               Cow position:
               chr11:62150912-62150787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               94, 42
               

               Conread position:
               3-131
               

               Cow position:
               chr11:4652994-4652865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-131
               

               Cow position:
               chr11:47837299-47837427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               3-132
               

               Cow position:
               chr11:4207290-4207417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:6633689-6633821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:11533949-11533823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:17638556-17638426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:23586617-23586747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:28644066-28644196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:35803114-35803245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               3-132
               

               Cow position:
               chr11:40573353-40573227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               3-132
               

               Cow position:
               chr11:41293839-41293709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:48272179-48272309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:56290490-56290620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:58938766-58938636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:59702465-59702600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr11:69119272-69119401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               3-132
               

               Cow position:
               chr11:82731019-82730889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-133
               

               Cow position:
               chr11:19606556-19606688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr11:8428490-8428620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               90, 112
               

               Conread position:
               3-134
               

               Cow position:
               chr11:18587617-18587485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-141
               

               Cow position:
               chr11:22977895-22977755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr11:9270746-9270589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               126, 29
               

               Conread position:
               3-160
               

               Cow position:
               chr11:19946414-19946572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr11:20602206-20602363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               3-160
               

               Cow position:
               chr11:35669973-35669812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               95, 79
               

               Conread position:
               3-160
               

               Cow position:
               chr11:55052850-55053012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-161
               

               Cow position:
               chr11:15958289-15958439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               3-161
               

               Cow position:
               chr11:84977380-84977219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               3-164
               

               Cow position:
               chr11:30355037-30355193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 114
               

               Conread position:
               3-164
               

               Cow position:
               chr11:63382212-63382048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-165
               

               Cow position:
               chr11:897652-897817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr11:33348208-33348043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr11:46427429-46427253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr11:66188338-66188168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr11:80820024-80819869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               3-167
               

               Cow position:
               chr11:30830635-30830466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-168
               

               Cow position:
               chr11:259193-259023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               3-168
               

               Cow position:
               chr11:2907544-2907378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               3-168
               

               Cow position:
               chr11:11125642-11125821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               95, 104
               

               Conread position:
               3-168
               

               Cow position:
               chr11:16801973-16801822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               3-168
               

               Cow position:
               chr11:30493975-30494144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               3-168
               

               Cow position:
               chr11:30867162-30867330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               3-168
               

               Cow position:
               chr11:55494658-55494817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 113
               

               Conread position:
               3-168
               

               Cow position:
               chr11:67615267-67615096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               3-168
               

               Cow position:
               chr11:82740488-82740648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 102
               

               Conread position:
               3-168
               

               Cow position:
               chr11:84764015-84764175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               3-169
               

               Cow position:
               chr11:3896720-3896544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               3-169
               

               Cow position:
               chr11:5219181-5219011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               3-169
               

               Cow position:
               chr11:21844153-21843985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               3-169
               

               Cow position:
               chr11:39249951-39250120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               95, 83
               

               Conread position:
               3-169
               

               Cow position:
               chr11:52690541-52690371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 50
               

               Conread position:
               3-169
               

               Cow position:
               chr11:62663253-62663088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               3-169
               

               Cow position:
               chr11:64408955-64409120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               3-169
               

               Cow position:
               chr11:70978755-70978585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 91
               

               Conread position:
               3-169
               

               Cow position:
               chr11:77013763-77013924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               3-174
               

               Cow position:
               chr11:10992244-10992421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               3-174
               

               Cow position:
               chr11:39060623-39060446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               3-176
               

               Cow position:
               chr11:58927562-58927735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               39, 49
               

               Conread position:
               3-176
               

               Cow position:
               chr11:63434079-63433904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 83
               

               Conread position:
               3-177
               

               Cow position:
               chr11:14470348-14470523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               3-177
               

               Cow position:
               chr11:17227663-17227489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               94, 36
               

               Conread position:
               3-177
               

               Cow position:
               chr11:18698858-18699032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 113
               

               Conread position:
               3-177
               

               Cow position:
               chr11:18851887-18852065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               3-177
               

               Cow position:
               chr11:23407443-23407622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-177
               

               Cow position:
               chr11:25119952-25119774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               3-177
               

               Cow position:
               chr11:48085897-48086080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-177
               

               Cow position:
               chr11:62742664-62742486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               3-177
               

               Cow position:
               chr11:78820130-78820311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               117, 48
               

               Conread position:
               3-178
               

               Cow position:
               chr11:30638971-30638788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr11:38211624-38211805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-178
               

               Cow position:
               chr11:42083451-42083617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               3-178
               

               Cow position:
               chr11:51729265-51729438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               95, 131
               

               Conread position:
               3-178
               

               Cow position:
               chr11:55761847-55762021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               168, 90
               

               Conread position:
               3-178
               

               Cow position:
               chr11:84890738-84890564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               3-179
               

               Cow position:
               chr11:3393230-3393050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               3-182
               

               Cow position:
               chr11:4225076-4225255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               95, 46
               

               Conread position:
               3-183
               

               Cow position:
               chr11:8988251-8988068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               3-186
               

               Cow position:
               chr11:41157-41341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               3-186
               

               Cow position:
               chr11:13043167-13042977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr11:18915005-18915181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 101
               

               Conread position:
               3-186
               

               Cow position:
               chr11:20205873-20205687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr11:30895025-30894832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr11:34467549-34467733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               94, 29
               

               Conread position:
               3-186
               

               Cow position:
               chr11:38639091-38639270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 6
               

               Conread position:
               3-186
               

               Cow position:
               chr11:42296641-42296456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 144
               

               Conread position:
               3-186
               

               Cow position:
               chr11:43360798-43360616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               3-186
               

               Cow position:
               chr11:62789109-62789298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr11:67600763-67600949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr11:77319393-77319583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr11:83032659-83032848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-188
               

               Cow position:
               chr11:62889915-62889717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-189
               

               Cow position:
               chr11:8525134-8524944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               95, 53
               

               Conread position:
               3-189
               

               Cow position:
               chr11:46746610-46746810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               3-209
               

               Cow position:
               chr11:30843040-30842830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 195
               

               Conread position:
               3-211
               

               Cow position:
               chr11:2917607-2917393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               3-214
               

               Cow position:
               chr11:64044212-64044414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 113
               

               Conread position:
               3-232
               

               Cow position:
               chr11:35213189-35212958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               94, 166
               

               Conread position:
               4-113
               

               Cow position:
               chr11:28168443-28168333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-118
               

               Cow position:
               chr11:76606652-76606767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               4-119
               

               Cow position:
               chr11:6194185-6194301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-123
               

               Cow position:
               chr11:64058364-64058244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-130
               

               Cow position:
               chr11:62609584-62609711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               4-130
               

               Cow position:
               chr11:84775054-84775180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-132
               

               Cow position:
               chr11:1071111-1070982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-132
               

               Cow position:
               chr11:34646569-34646698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-132
               

               Cow position:
               chr11:40478873-40478744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               4-132
               

               Cow position:
               chr11:54334308-54334437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               4-132
               

               Cow position:
               chr11:72292532-72292659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 103
               

               Conread position:
               4-151
               

               Cow position:
               chr11:59872910-59873059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               4-167
               

               Cow position:
               chr11:24601944-24602114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               72, 118
               

               Conread position:
               4-167
               

               Cow position:
               chr11:30964325-30964495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               93, 38
               

               Conread position:
               4-168
               

               Cow position:
               chr11:11469668-11469500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               141
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-168
               

               Cow position:
               chr11:24599407-24599242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               123, 69
               

               Conread position:
               4-168
               

               Cow position:
               chr11:33409282-33409110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-169
               

               Cow position:
               chr11:17083330-17083160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               94, 117
               

               Conread position:
               4-174
               

               Cow position:
               chr11:39462603-39462778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               4-174
               

               Cow position:
               chr11:46884353-46884534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               99, 89
               

               Conread position:
               4-177
               

               Cow position:
               chr11:10562988-10563167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               4-177
               

               Cow position:
               chr11:41986066-41985886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               4-186
               

               Cow position:
               chr11:2925316-2925137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               4-186
               

               Cow position:
               chr11:18447512-18447330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               4-186
               

               Cow position:
               chr11:75874775-75874601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 100
               

               Conread position:
               4-186
               

               Cow position:
               chr11:80639570-80639381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 159
               

               Conread position:
               4-187
               

               Cow position:
               chr11:28993758-28993576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               93, 78
               

               Conread position:
               4-188
               

               Cow position:
               chr11:15382523-15382322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               4-188
               

               Cow position:
               chr11:63866679-63866488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               90, 15
               

               Conread position:
               4-213
               

               Cow position:
               chr11:56114918-56115137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-113
               

               Cow position:
               chr11:33341164-33341055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-119
               

               Cow position:
               chr11:65767180-65767295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-126
               

               Cow position:
               chr11:34413359-34413237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-129
               

               Cow position:
               chr11:10363405-10363277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               5-130
               

               Cow position:
               chr11:47882784-47882911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-130
               

               Cow position:
               chr11:83033255-83033133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               5-132
               

               Cow position:
               chr11:8107425-8107553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               93, 50
               

               Conread position:
               5-132
               

               Cow position:
               chr11:79019078-79018950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-133
               

               Cow position:
               chr11:36329054-36328928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 99
               

               Conread position:
               5-153
               

               Cow position:
               chr11:34113245-34113400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               5-153
               

               Cow position:
               chr11:65803890-65803741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 129
               

               Conread position:
               5-166
               

               Cow position:
               chr11:15339044-15339211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 75
               

               Conread position:
               5-167
               

               Cow position:
               chr11:31410897-31410728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-168
               

               Cow position:
               chr11:8437713-8437534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-168
               

               Cow position:
               chr11:31227943-31228110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               92, 153
               

               Conread position:
               5-168
               

               Cow position:
               chr11:44222870-44223037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               5-168
               

               Cow position:
               chr11:45646612-45646440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 49
               

               Conread position:
               5-168
               

               Cow position:
               chr11:69977951-69978121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-169
               

               Cow position:
               chr11:27248474-27248642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 42
               

               Conread position:
               5-169
               

               Cow position:
               chr11:27746904-27747072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               141
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-169
               

               Cow position:
               chr11:39499337-39499509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-169
               

               Cow position:
               chr11:52297240-52297069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-169
               

               Cow position:
               chr11:62239725-62239895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               92, 140
               

               Conread position:
               5-169
               

               Cow position:
               chr11:63165666-63165497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-169
               

               Cow position:
               chr11:63435502-63435676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               5-169
               

               Cow position:
               chr11:81162452-81162293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               93, 107
               

               Conread position:
               5-170
               

               Cow position:
               chr11:71021981-71022154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               92, 147
               

               Conread position:
               5-174
               

               Cow position:
               chr11:47772409-47772223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-174
               

               Cow position:
               chr11:48296014-48296184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               5-177
               

               Cow position:
               chr11:29786518-29786331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               5-177
               

               Cow position:
               chr11:42160073-42159899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               5-177
               

               Cow position:
               chr11:46922905-46922725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               5-177
               

               Cow position:
               chr11:52380891-52380710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-178
               

               Cow position:
               chr11:15017037-15017222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-178
               

               Cow position:
               chr11:21728295-21728125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               5-178
               

               Cow position:
               chr11:29960279-29960456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 42
               

               Conread position:
               5-178
               

               Cow position:
               chr11:35580241-35580425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-178
               

               Cow position:
               chr11:49872904-49872723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               5-178
               

               Cow position:
               chr11:67614941-67614761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               5-178
               

               Cow position:
               chr11:71390580-71390410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               5-186
               

               Cow position:
               chr11:1932511-1932317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               5-186
               

               Cow position:
               chr11:17036547-17036361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               5-186
               

               Cow position:
               chr11:17721821-17721630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-186
               

               Cow position:
               chr11:74316690-74316877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               5-187
               

               Cow position:
               chr11:47899249-47899422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               130, 93
               

               Conread position:
               5-203
               

               Cow position:
               chr11:44636773-44636574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 111
               

               Conread position:
               5-243
               

               Cow position:
               chr11:16342248-16342025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               92, 117
               

               Conread position:
               6-125
               

               Cow position:
               chr11:76114628-76114744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 72
               

               Conread position:
               6-132
               

               Cow position:
               chr11:67312762-67312889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               6-168
               

               Cow position:
               chr11:905401-905241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 105
               

               Conread position:
               6-169
               

               Cow position:
               chr11:19500807-19500650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               6-186
               

               Cow position:
               chr11:64104980-64105164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               92, 36
               

               Conread position:
               7-131
               

               Cow position:
               chr11:30954983-30955108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               7-166
               

               Cow position:
               chr11:68206862-68206695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-168
               

               Cow position:
               chr11:3175656-3175824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               7-174
               

               Cow position:
               chr11:83043380-83043208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               7-186
               

               Cow position:
               chr11:48315414-48315228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               7-186
               

               Cow position:
               chr11:62620359-62620547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               7-187
               

               Cow position:
               chr11:4637189-4637003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               7-194
               

               Cow position:
               chr11:80586257-80586447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               7-194
               

               Cow position:
               chr11:80923338-80923144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 40
               

               Conread position:
               8-186
               

               Cow position:
               chr11:63478361-63478533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               8-212
               

               Cow position:
               chr11:44031995-44032207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               9-168
               

               Cow position:
               chr11:1067455-1067285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               91, 84
               

               Conread position:
               9-168
               

               Cow position:
               chr11:33993149-33993307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               9-169
               

               Cow position:
               chr11:15607987-15607835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               9-169
               

               Cow position:
               chr11:45350527-45350356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 89
               

               Conread position:
               9-186
               

               Cow position:
               chr11:9699260-9699084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               89, 112
               

               Conread position:
               10-186
               

               Cow position:
               chr11:13684727-13684550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               12-129
               

               Cow position:
               chr11:3769321-3769203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               12-177
               

               Cow position:
               chr11:46784462-46784626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               12-219
               

               Cow position:
               chr11:32254229-32254011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 197
               

               Conread position:
               13-132
               

               Cow position:
               chr11:30805144-30805026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               13-132
               

               Cow position:
               chr11:41983178-41983057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               13-167
               

               Cow position:
               chr11:26144107-26143942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               13-173
               

               Cow position:
               chr11:15366984-15366819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               13-177
               

               Cow position:
               chr11:40395428-40395598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               13-178
               

               Cow position:
               chr11:67948753-67948593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               84, 103
               

               Conread position:
               13-179
               

               Cow position:
               chr11:86895365-86895536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               13-183
               

               Cow position:
               chr11:79707702-79707871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 65
               

               Conread position:
               13-186
               

               Cow position:
               chr11:48900856-48900688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 104
               

               Conread position:
               13-186
               

               Cow position:
               chr11:51196094-51195926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               84, 111
               

               Conread position:
               13-186
               

               Cow position:
               chr11:77017230-77017401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               14-125
               

               Cow position:
               chr11:34238581-34238469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               14-167
               

               Cow position:
               chr11:30210894-30211042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 107
               

               Conread position:
               14-178
               

               Cow position:
               chr11:2484805-2484632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               14-182
               

               Cow position:
               chr11:31875082-31875261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               15-131
               

               Cow position:
               chr11:17195840-17195726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               15-131
               

               Cow position:
               chr11:70741133-70741250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               15-132
               

               Cow position:
               chr11:26845603-26845486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               15-161
               

               Cow position:
               chr11:73977313-73977153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               15-164
               

               Cow position:
               chr11:37425157-37425005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 32
               

               Conread position:
               15-186
               

               Cow position:
               chr11:20238667-20238847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               15-186
               

               Cow position:
               chr11:45435070-45435246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 151
               

               Conread position:
               15-186
               

               Cow position:
               chr11:49396535-49396355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               15-188
               

               Cow position:
               chr11:1485236-1485061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               16-169
               

               Cow position:
               chr11:58813079-58812931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 37
               

               Conread position:
               16-174
               

               Cow position:
               chr11:22884405-22884565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               16-177
               

               Cow position:
               chr11:30986633-30986798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               16-177
               

               Cow position:
               chr11:63999100-63998928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               16-177
               

               Cow position:
               chr11:85271747-85271581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               16-186
               

               Cow position:
               chr11:27462106-27461940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               17-212
               

               Cow position:
               chr11:45671377-45671185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               18-182
               

               Cow position:
               chr11:18509037-18508861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               18-186
               

               Cow position:
               chr11:25320179-25320335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 107
               

               Conread position:
               18-186
               

               Cow position:
               chr11:63484932-63485103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 6
               

               Conread position:
               18-188
               

               Cow position:
               chr11:68905083-68904915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               18-210
               

               Cow position:
               chr11:48659928-48660128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               19-186
               

               Cow position:
               chr11:66685911-66685739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               20-168
               

               Cow position:
               chr11:64334833-64334986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               20-169
               

               Cow position:
               chr11:66041273-66041426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               20-186
               

               Cow position:
               chr11:60720460-60720283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               23-168
               

               Cow position:
               chr11:34136239-34136394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               23-186
               

               Cow position:
               chr11:58185881-58186043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               71, 98
               

               Conread position:
               23-186
               

               Cow position:
               chr11:80008069-80007891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               23-252
               

               Cow position:
               chr11:84228719-84228484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               75, 96
               

               Conread position:
               24-116
               

               Cow position:
               chr11:3790842-3790935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               24-121
               

               Cow position:
               chr11:13075811-13075714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               24-132
               

               Cow position:
               chr11:31326006-31326115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               24-168
               

               Cow position:
               chr11:80296855-80296703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               24-178
               

               Cow position:
               chr11:21173438-21173273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               24-178
               

               Cow position:
               chr11:30192178-30192342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 152
               

               Conread position:
               24-178
               

               Cow position:
               chr11:45631766-45631616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 108
               

               Conread position:
               27-129
               

               Cow position:
               chr11:46452138-46452241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               28-154
               

               Cow position:
               chr11:54573170-54573292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               29-126
               

               Cow position:
               chr11:57491479-57491382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 94
               

               Conread position:
               29-132
               

               Cow position:
               chr11:35860587-35860689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               29-153
               

               Cow position:
               chr11:61178362-61178490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 119
               

               Conread position:
               29-174
               

               Cow position:
               chr11:30654660-30654807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               29-177
               

               Cow position:
               chr11:49149053-49149208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               29-177
               

               Cow position:
               chr11:77227543-77227692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 106
               

               Conread position:
               29-177
               

               Cow position:
               chr11:83066492-83066654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               29-186
               

               Cow position:
               chr11:66104391-66104222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               30-132
               

               Cow position:
               chr11:434870-434766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               30-177
               

               Cow position:
               chr11:40818621-40818470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               30-178
               

               Cow position:
               chr11:21736293-21736147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 133
               

               Conread position:
               32-168
               

               Cow position:
               chr11:15279005-15278862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               32-178
               

               Cow position:
               chr11:42206429-42206580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               66, 144
               

               Conread position:
               32-186
               

               Cow position:
               chr11:5176369-5176210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 62
               

               Conread position:
               32-188
               

               Cow position:
               chr11:19148129-19147969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               33-177
               

               Cow position:
               chr11:18910877-18910722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               33-184
               

               Cow position:
               chr11:48544446-48544605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               33-186
               

               Cow position:
               chr11:6255995-6255838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               33-186
               

               Cow position:
               chr11:38194201-38194348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               33-195
               

               Cow position:
               chr11:71814715-71814881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 160
               

               Conread position:
               35-174
               

               Cow position:
               chr11:69676342-69676196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 124
               

               Conread position:
               35-185
               

               Cow position:
               chr11:36104323-36104487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               36-130
               

               Cow position:
               chr11:58228627-58228722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               36-132
               

               Cow position:
               chr11:56895963-56895867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-177
               

               Cow position:
               chr11:4621419-4621273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               36-185
               

               Cow position:
               chr11:4411857-4411703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               36-188
               

               Cow position:
               chr11:62483950-62483801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 80
               

               Conread position:
               36-252
               

               Cow position:
               chr11:75388363-75388142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               37-168
               

               Cow position:
               chr11:74839623-74839759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               37-177
               

               Cow position:
               chr11:39855005-39854860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               37-178
               

               Cow position:
               chr11:53318568-53318699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               37-194
               

               Cow position:
               chr11:63499118-63498949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               37-212
               

               Cow position:
               chr11:78381052-78380870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 164
               

               Conread position:
               37-216
               

               Cow position:
               chr11:37041984-37042175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 165
               

               Conread position:
               38-166
               

               Cow position:
               chr11:25721981-25721852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               38-178
               

               Cow position:
               chr11:42066878-42067028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               39-164
               

               Cow position:
               chr11:83249417-83249548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               39-166
               

               Cow position:
               chr11:53651655-53651793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               39-168
               

               Cow position:
               chr11:35276284-35276407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               39-168
               

               Cow position:
               chr11:48247047-48246923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 77
               

               Conread position:
               39-177
               

               Cow position:
               chr11:78672685-78672833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               39-179
               

               Cow position:
               chr11:54872745-54872597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 31
               

               Conread position:
               39-186
               

               Cow position:
               chr11:15591460-15591309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               39-188
               

               Cow position:
               chr11:30857052-30857208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               39-194
               

               Cow position:
               chr11:75918603-75918757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               40-177
               

               Cow position:
               chr11:53487138-53486998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               43-160
               

               Cow position:
               chr11:18210155-18210038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               43-174
               

               Cow position:
               chr11:62081949-62081813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               43-177
               

               Cow position:
               chr11:82733131-82732992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               43-179
               

               Cow position:
               chr11:7617188-7617043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               43-186
               

               Cow position:
               chr11:8422099-8421954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               44-176
               

               Cow position:
               chr11:47102820-47102953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 125
               

               Conread position:
               47-169
               

               Cow position:
               chr11:1841988-1842111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               47-186
               

               Cow position:
               chr11:57170578-57170439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               49-177
               

               Cow position:
               chr11:81928483-81928350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               50-178
               

               Cow position:
               chr11:49057417-49057547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               51-178
               

               Cow position:
               chr11:63483969-63484104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               51-186
               

               Cow position:
               chr11:75915020-75915157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               53-178
               

               Cow position:
               chr11:4653226-4653096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               54-186
               

               Cow position:
               chr11:17369560-17369697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               55-186
               

               Cow position:
               chr11:65431549-65431688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               58-177
               

               Cow position:
               chr11:33289429-33289307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               60-186
               

               Cow position:
               chr11:28078529-28078660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               61-214
               

               Cow position:
               chr11:33824869-33824715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               63-178
               

               Cow position:
               chr11:3267617-3267504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               108, 53
               

               Conread position:
               64-177
               

               Cow position:
               chr11:4602192-4602313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               68-179
               

               Cow position:
               chr11:63977101-63977220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-114
Cow position:	chr11:2900744-2900630 (view UCSC Genome Browser custom track)
Alignm length:	115
Alignm identity:	95
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	96, 0
Conread position:	1-129
Cow position:	chr11:35684524-35684396 (view UCSC Genome Browser custom track)
Alignm length:	130
Alignm identity:	110
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	96, 125
Conread position:	1-131
Cow position:	chr11:62168354-62168224 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	98
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-132
Cow position:	chr11:17831244-17831114 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	105
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	97, 28
Conread position:	1-151
Cow position:	chr11:72884617-72884466 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	119
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	96, 40
Conread position:	1-160
Cow position:	chr11:35536564-35536729 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	131
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	97, 48
Conread position:	1-166
Cow position:	chr11:49152926-49153091 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	128
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	97, 48
Conread position:	1-167
Cow position:	chr11:49934754-49934591 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	123
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	97, 115
Conread position:	1-168
Cow position:	chr11:21885810-21885986 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	144
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	97, 64
Conread position:	1-169
Cow position:	chr11:50152837-50152659 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	142
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	95, 0
Conread position:	1-170
Cow position:	chr11:9698879-9699045 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	140
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	97, 31
Conread position:	1-172
Cow position:	chr11:62812973-62812795 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	151
Alignm E-value:	5.60519e-45
Alignm gaps (pig, cow):	96, 0
Conread position:	1-173
Cow position:	chr11:8684103-8683920 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	138
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	102, 0
Conread position:	1-174
Cow position:	chr11:41603709-41603542 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	132
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	95, 88
Conread position:	1-177
Cow position:	chr11:27449634-27449470 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	133
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	97, 18
Conread position:	1-178
Cow position:	chr11:17676396-17676211 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	143
Alignm E-value:	5e-33
Alignm gaps (pig, cow):	97, 0
Conread position:	1-186
Cow position:	chr11:21852325-21852145 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	132
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	97, 0
Conread position:	1-194
Cow position:	chr11:39115472-39115655 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	150
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	170, 48
Conread position:	2-178
Cow position:	chr11:6194383-6194552 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	135
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	96, 30
Conread position:	3-98
Cow position:	chr11:69392541-69392636 (view UCSC Genome Browser custom track)
Alignm length:	96
Alignm identity:	80
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	0, 0