Cow genome map

Conread name: Pig2-73K09

Conread position: 1-121
Cow position: chr27:11466503-11466623 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 106

Conread position: 1-131
Cow position: chr27:4672978-4672843 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1-131
Cow position: chr27:26959652-26959784 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 1-154
Cow position: chr27:22418808-22418963 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 19

Conread position: 1-166
Cow position: chr27:23485171-23485003 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 97, 46

Conread position: 1-177
Cow position: chr27:23918072-23918256 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1-178
Cow position: chr27:11561738-11561551 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 1-210
Cow position: chr27:27648355-27648567 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 195

Conread position: 2-125
Cow position: chr27:12191517-12191642 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 2-219
Cow position: chr27:16246768-16246542 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 219

Conread position: 3-116
Cow position: chr27:20553692-20553578 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 3-127
Cow position: chr27:19717875-19717750 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 3-130
Cow position: chr27:27255948-27255820 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 3-131
Cow position: chr27:24305394-24305269 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 38

Conread position: 3-132
Cow position: chr27:6302508-6302637 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 60

Conread position: 3-132
Cow position: chr27:12710209-12710081 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 88

Conread position: 3-132
Cow position: chr27:17918353-17918483 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 3-132
Cow position: chr27:22569744-22569615 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 82

Conread position: 3-132
Cow position: chr27:27641052-27641180 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 3-132
Cow position: chr27:30489450-30489580 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 113
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 3-133
Cow position: chr27:31148721-31148591 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 104

Conread position: 3-160
Cow position: chr27:20812865-20812710 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 118

Conread position: 3-164
Cow position: chr27:9977645-9977476 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 92

Conread position: 3-164
Cow position: chr27:20481406-20481565 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 8

Conread position: 3-168
Cow position: chr27:18435173-18435343 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 3-168
Cow position: chr27:23560071-23560242 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 142
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 3-168
Cow position: chr27:24223912-24223739 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 51

Conread position: 3-168
Cow position: chr27:26617366-26617199 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 21

Conread position: 3-168
Cow position: chr27:28206759-28206591 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 20

Conread position: 3-168
Cow position: chr27:29593669-29593844 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 40

Conread position: 3-169
Cow position: chr27:8353436-8353282 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 43

Conread position: 3-169
Cow position: chr27:13411406-13411582 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 86

Conread position: 3-169
Cow position: chr27:14670422-14670594 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 3-169
Cow position: chr27:16103767-16103597 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 44

Conread position: 3-169
Cow position: chr27:17397494-17397665 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 145
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 94, 0

Conread position: 3-169
Cow position: chr27:17646208-17646371 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 113

Conread position: 3-169
Cow position: chr27:26999462-26999637 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 100

Conread position: 3-169
Cow position: chr27:29597791-29597959 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 10

Conread position: 3-169
Cow position: chr27:30890251-30890087 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 81

Conread position: 3-169
Cow position: chr27:31231121-31231293 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 3-174
Cow position: chr27:10979823-10979641 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 3-174
Cow position: chr27:15332335-15332507 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 104

Conread position: 3-174
Cow position: chr27:24477377-24477207 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 118

Conread position: 3-174
Cow position: chr27:31386670-31386849 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-177
Cow position: chr27:4858679-4858841 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 3-177
Cow position: chr27:19508973-19508790 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 3-177
Cow position: chr27:19660892-19660706 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 3-177
Cow position: chr27:20770568-20770738 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 126

Conread position: 3-177
Cow position: chr27:21393547-21393715 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 95, 119

Conread position: 3-177
Cow position: chr27:29431424-29431254 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 95, 32

Conread position: 3-178
Cow position: chr27:15315477-15315299 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 24

Conread position: 3-178
Cow position: chr27:22547439-22547612 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 41

Conread position: 3-178
Cow position: chr27:26323408-26323218 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 12

Conread position: 3-178
Cow position: chr27:26643645-26643479 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 38

Conread position: 3-186
Cow position: chr27:426929-426739 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 91, 39

Conread position: 3-186
Cow position: chr27:12459244-12459057 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 19

Conread position: 3-186
Cow position: chr27:12596731-12596551 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 7, 21

Conread position: 3-186
Cow position: chr27:15003018-15003210 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 3-186
Cow position: chr27:17102856-17102669 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 95, 79

Conread position: 3-186
Cow position: chr27:22035417-22035602 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 3-186
Cow position: chr27:22171257-22171071 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 95, 44

Conread position: 3-186
Cow position: chr27:23452421-23452232 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 31

Conread position: 3-186
Cow position: chr27:23594281-23594088 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 53

Conread position: 3-186
Cow position: chr27:31210507-31210319 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 120, 36

Conread position: 3-188
Cow position: chr27:299421-299607 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 40

Conread position: 3-188
Cow position: chr27:1636975-1637159 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 93

Conread position: 3-188
Cow position: chr27:6162450-6162636 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 3-188
Cow position: chr27:8790781-8790975 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 152

Conread position: 3-188
Cow position: chr27:30455954-30455760 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 99

Conread position: 3-191
Cow position: chr27:7935196-7935394 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 3-194
Cow position: chr27:6319879-6319681 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 3-194
Cow position: chr27:23890898-23890696 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 189

Conread position: 3-212
Cow position: chr27:16284435-16284233 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 119, 0

Conread position: 4-130
Cow position: chr27:24738839-24738966 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 105

Conread position: 4-132
Cow position: chr27:27673057-27673185 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 30

Conread position: 4-132
Cow position: chr27:30359366-30359237 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 4-166
Cow position: chr27:1768665-1768833 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 93, 19

Conread position: 4-168
Cow position: chr27:20828751-20828920 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 4-177
Cow position: chr27:590803-590991 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 5-117
Cow position: chr27:27532098-27531983 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 5-123
Cow position: chr27:22348448-22348329 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 38

Conread position: 5-127
Cow position: chr27:4720157-4720277 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 42

Conread position: 5-129
Cow position: chr27:237227-237104 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 63

Conread position: 5-132
Cow position: chr27:788839-788966 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 102

Conread position: 5-132
Cow position: chr27:6674237-6674111 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 41

Conread position: 5-132
Cow position: chr27:7212755-7212883 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 5-132
Cow position: chr27:22423474-22423347 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 112

Conread position: 5-132
Cow position: chr27:28541156-28541284 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 8

Conread position: 5-154
Cow position: chr27:26506700-26506544 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 42

Conread position: 5-166
Cow position: chr27:15454166-15454000 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 42

Conread position: 5-166
Cow position: chr27:19387976-19387808 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 32

Conread position: 5-168
Cow position: chr27:6106658-6106491 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 92, 37

Conread position: 5-168
Cow position: chr27:20068019-20068188 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 17

Conread position: 5-169
Cow position: chr27:6541590-6541421 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 5-169
Cow position: chr27:15668813-15668988 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 5-169
Cow position: chr27:21669159-21669326 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 108

Conread position: 5-169
Cow position: chr27:23107946-23108116 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 21

Conread position: 5-174
Cow position: chr27:26238983-26238805 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 114, 0

Conread position: 5-177
Cow position: chr27:19685755-19685932 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 161

Conread position: 5-177
Cow position: chr27:20897067-20897242 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 41

Conread position: 5-177
Cow position: chr27:22220512-22220328 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 5-177
Cow position: chr27:24693371-24693196 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 51

Conread position: 5-177
Cow position: chr27:26400763-26400939 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 135

Conread position: 5-178
Cow position: chr27:7343470-7343652 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 5-186
Cow position: chr27:7412351-7412163 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 5-186
Cow position: chr27:15409078-15409256 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 118

Conread position: 5-186
Cow position: chr27:27055244-27055065 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 42

Conread position: 5-186
Cow position: chr27:29615000-29614811 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 5-189
Cow position: chr27:19576365-19576557 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 92, 0

Conread position: 5-224
Cow position: chr27:4944556-4944778 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 110

Conread position: 6-140
Cow position: chr27:22179812-22179944 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 41

Conread position: 6-177
Cow position: chr27:20888677-20888513 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 101

Conread position: 6-186
Cow position: chr27:3306731-3306555 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 31

Conread position: 6-186
Cow position: chr27:19741451-19741622 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 108

Conread position: 6-189
Cow position: chr27:435191-434998 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 108

Conread position: 7-130
Cow position: chr27:20486014-20485890 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 71

Conread position: 7-169
Cow position: chr27:13204415-13204251 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 139
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 91, 39

Conread position: 7-185
Cow position: chr27:28478536-28478353 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 90, 0

Conread position: 8-177
Cow position: chr27:7425233-7425410 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 9-123
Cow position: chr27:9697607-9697493 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 107

Conread position: 9-212
Cow position: chr27:27632647-27632853 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 89, 56

Conread position: 9-219
Cow position: chr27:10581483-10581269 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 25

Conread position: 10-177
Cow position: chr27:4398538-4398708 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 130

Conread position: 10-212
Cow position: chr27:11134039-11133829 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 39

Conread position: 12-177
Cow position: chr27:26226339-26226510 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 13-132
Cow position: chr27:17918767-17918887 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 13-179
Cow position: chr27:1184227-1184398 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 84, 168

Conread position: 13-186
Cow position: chr27:8629921-8630104 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 36

Conread position: 13-186
Cow position: chr27:11480686-11480869 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 13-186
Cow position: chr27:11982696-11982879 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 57

Conread position: 13-186
Cow position: chr27:15865557-15865379 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 13-186
Cow position: chr27:16705201-16705022 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 13-188
Cow position: chr27:12284944-12284761 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 26

Conread position: 14-177
Cow position: chr27:29493951-29494120 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 136

Conread position: 14-186
Cow position: chr27:28001863-28002034 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 78

Conread position: 14-188
Cow position: chr27:26437172-26437353 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 15-131
Cow position: chr27:20517606-20517495 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 15-132
Cow position: chr27:7448113-7448230 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 101

Conread position: 15-132
Cow position: chr27:16589754-16589872 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 15-132
Cow position: chr27:23504013-23504131 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 15-164
Cow position: chr27:2949379-2949527 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 126
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 48

Conread position: 15-179
Cow position: chr27:20092886-20093038 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 156, 83

Conread position: 16-213
Cow position: chr27:23929910-23929717 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 16

Conread position: 17-177
Cow position: chr27:28062258-28062416 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 30

Conread position: 17-214
Cow position: chr27:22386821-22386625 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 81, 99

Conread position: 18-169
Cow position: chr27:20325296-20325143 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 88

Conread position: 19-159
Cow position: chr27:27528876-27529023 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 19-186
Cow position: chr27:20048578-20048406 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 19-220
Cow position: chr27:21025630-21025428 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 88

Conread position: 20-157
Cow position: chr27:1067511-1067371 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 20-165
Cow position: chr27:31004878-31004728 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 21-160
Cow position: chr27:18491498-18491353 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 86

Conread position: 21-169
Cow position: chr27:21951036-21951194 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 23-165
Cow position: chr27:24035336-24035486 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 24-178
Cow position: chr27:26118439-26118273 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 24-186
Cow position: chr27:22792771-22792608 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 94

Conread position: 24-186
Cow position: chr27:26940018-26939847 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 26-177
Cow position: chr27:19557326-19557170 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 27-177
Cow position: chr27:24358269-24358118 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 47

Conread position: 29-168
Cow position: chr27:13251951-13251811 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 96

Conread position: 29-211
Cow position: chr27:22497956-22497772 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 169

Conread position: 30-163
Cow position: chr27:3498484-3498348 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 30-167
Cow position: chr27:24440289-24440434 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 30-169
Cow position: chr27:27449952-27450097 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 30-186
Cow position: chr27:6151231-6151083 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 19

Conread position: 31-166
Cow position: chr27:27606364-27606507 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 32-127
Cow position: chr27:23495778-23495873 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 17

Conread position: 32-160
Cow position: chr27:25382220-25382351 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 32-169
Cow position: chr27:23477877-23477734 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 32-174
Cow position: chr27:23177381-23177531 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 32-177
Cow position: chr27:2957343-2957195 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 82

Conread position: 32-178
Cow position: chr27:14343517-14343659 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 85

Conread position: 32-188
Cow position: chr27:26909660-26909821 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 33-168
Cow position: chr27:31031385-31031251 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 64, 96

Conread position: 33-177
Cow position: chr27:20283566-20283422 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 73

Conread position: 33-193
Cow position: chr27:9253183-9253350 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 33-194
Cow position: chr27:5781018-5780862 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 83

Conread position: 34-131
Cow position: chr27:29183287-29183387 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 35-227
Cow position: chr27:23100720-23100917 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 78

Conread position: 36-168
Cow position: chr27:31153630-31153771 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 36-194
Cow position: chr27:641118-641276 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 94

Conread position: 36-194
Cow position: chr27:31183503-31183331 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 36-212
Cow position: chr27:15867317-15867133 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 58

Conread position: 37-168
Cow position: chr27:26087242-26087104 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 37-177
Cow position: chr27:28476187-28476331 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 37-179
Cow position: chr27:20749084-20749227 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 66

Conread position: 37-186
Cow position: chr27:22748254-22748097 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 38-178
Cow position: chr27:11528856-11528705 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 39-160
Cow position: chr27:22213082-22212961 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 43

Conread position: 39-169
Cow position: chr27:24755531-24755397 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 96

Conread position: 39-177
Cow position: chr27:178787-178641 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 42-229
Cow position: chr27:21419269-21419463 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 43-174
Cow position: chr27:24446226-24446357 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 79

Conread position: 43-178
Cow position: chr27:29961662-29961800 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 66

Conread position: 44-166
Cow position: chr27:31219184-31219057 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 107

Conread position: 46-174
Cow position: chr27:21661053-21660917 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 47-177
Cow position: chr27:20561497-20561366 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 8

Conread position: 58-186
Cow position: chr27:22150789-22150924 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 59-174
Cow position: chr27:624314-624435 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 23

Conread position: 60-169
Cow position: chr27:21447926-21448036 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 68-186
Cow position: chr27:5227427-5227545 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 70

Conread position: 68-186
Cow position: chr27:23527606-23527730 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 73-216
Cow position: chr27:20302457-20302313 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 125

Show alignments to all cow chromosomes.