Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 254-453 |
| Cow position: | chr10:31005371-31005173 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 254-481 |
| Cow position: | chr10:32928438-32928670 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 257-481 |
| Cow position: | chr10:51696432-51696646 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 197, 19 |
| Conread position: | 263-481 |
| Cow position: | chr10:32583596-32583814 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 274-481 |
| Cow position: | chr10:9798499-9798294 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 279-406 |
| Cow position: | chr10:11059493-11059618 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 282-473 |
| Cow position: | chr10:53935041-53934839 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 284-502 |
| Cow position: | chr10:56732748-56732963 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 287-502 |
| Cow position: | chr10:61588555-61588333 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 136, 18 |
| Conread position: | 288-473 |
| Cow position: | chr10:35862523-35862329 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 288-475 |
| Cow position: | chr10:27362199-27362386 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 288-481 |
| Cow position: | chr10:5543545-5543344 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 288-482 |
| Cow position: | chr10:24308189-24308010 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 291-481 |
| Cow position: | chr10:3998619-3998807 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 292-458 |
| Cow position: | chr10:45729211-45729044 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 292-466 |
| Cow position: | chr10:4711341-4711518 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 292-471 |
| Cow position: | chr10:19394867-19394689 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-475 |
| Cow position: | chr10:4994846-4994667 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 292-481 |
| Cow position: | chr10:1423543-1423744 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 292-481 |
| Cow position: | chr10:20372420-20372222 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr10:20735418-20735605 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 292-481 |
| Cow position: | chr10:35767367-35767178 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-481 |
| Cow position: | chr10:36001917-36002102 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr10:47158817-47159009 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 292-481 |
| Cow position: | chr10:53248297-53248106 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 292-482 |
| Cow position: | chr10:15318595-15318788 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 103 |
| Conread position: | 292-482 |
| Cow position: | chr10:54469671-54469490 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-482 |
| Cow position: | chr10:63940489-63940677 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 292-498 |
| Cow position: | chr10:34300216-34300427 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 292-501 |
| Cow position: | chr10:22321238-22321448 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 292-502 |
| Cow position: | chr10:9083010-9083226 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr10:15292983-15293196 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr10:24732025-24732238 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 293-472 |
| Cow position: | chr10:35887690-35887508 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 293-502 |
| Cow position: | chr10:23912784-23912572 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 132, 13 |
| Conread position: | 294-473 |
| Cow position: | chr10:42230378-42230556 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 294-475 |
| Cow position: | chr10:8093602-8093417 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 294-481 |
| Cow position: | chr10:21461954-21462142 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 294-481 |
| Cow position: | chr10:37444503-37444316 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 294-481 |
| Cow position: | chr10:60936666-60936849 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 294-482 |
| Cow position: | chr10:6235710-6235527 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 294-501 |
| Cow position: | chr10:29628237-29628022 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 297-478 |
| Cow position: | chr10:50332309-50332483 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 298-453 |
| Cow position: | chr10:10046331-10046180 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 121, 8 |
| Conread position: | 298-473 |
| Cow position: | chr10:14976075-14975900 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 8 |
| Conread position: | 298-481 |
| Cow position: | chr10:59839568-59839383 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 95, 8 |
| Conread position: | 308-453 |
| Cow position: | chr10:15867961-15868109 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 308-473 |
| Cow position: | chr10:34554363-34554192 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 115, 87 |
| Conread position: | 308-475 |
| Cow position: | chr10:5607368-5607541 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 308-481 |
| Cow position: | chr10:2517115-2517284 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 135, 90 |
| Conread position: | 308-481 |
| Cow position: | chr10:21709167-21708999 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 308-481 |
| Cow position: | chr10:59664239-59664073 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 308-482 |
| Cow position: | chr10:25149617-25149799 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 308-492 |
| Cow position: | chr10:58935464-58935277 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 309-449 |
| Cow position: | chr10:69528266-69528124 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 309-498 |
| Cow position: | chr10:25045956-25045763 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 86, 103 |
| Conread position: | 310-502 |
| Cow position: | chr10:52113938-52113742 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 311-481 |
| Cow position: | chr10:23376735-23376559 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 132 |
| Conread position: | 311-502 |
| Cow position: | chr10:5502752-5502955 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 312-481 |
| Cow position: | chr10:65071040-65071216 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 86 |
| Conread position: | 316-481 |
| Cow position: | chr10:48317221-48317054 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 319-471 |
| Cow position: | chr10:25564-25724 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 319-481 |
| Cow position: | chr10:59152127-59151958 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 323-467 |
| Cow position: | chr10:2974348-2974189 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 324-481 |
| Cow position: | chr10:50039155-50039301 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 344-481 |
| Cow position: | chr10:2853885-2853740 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 346-502 |
| Cow position: | chr10:25882189-25882347 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 51 |
| Conread position: | 358-481 |
| Cow position: | chr10:30106327-30106203 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 359-502 |
| Cow position: | chr10:30787832-30787685 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 25 |
Show alignments to all cow chromosomes.